Genomic Feature
ecu3
- ID
- ZDB-ALT-150717-4
- Name
- ecu3
- Synonyms
-
- Pgr2d (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yong Zhu Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 41820462 - 41820471 (GRCz11) (1) Details
- Nucleotide change
- TGGATGTCCG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp deleted from position 616 to 625 (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation: from position 263 to 617 (1)
- Flanking Sequence
-
ATTTTGGAGACGCGGGGACTTTACGCGGCAGCGCGCCCGCATCGAGCAGCGATGCTTTGGATCACCTTTCTGCGCTGGACTTGCCTCTCGGTACCAAACCTTACACTGAACACATAGACGACTTTCTAAAAGCAGAAACCGGACAGTGGAACGCAAAGACAGATTGTCCGGAGAGTTCGTATATTAAAGATGATAAGGAGCTAAATCTCATCATGGAGCCACCGAACCCTGATTTCGACATCACCGTGTTGGAAAGCTGCTACGACTCCACCGAGAGGAAACAACAGTGTGAGTTTATTGAGGAGTCCTCAGCTTTAATCTCATCTCAAGCGATCCAACAGGTGGTTGTGGACAGTTCCTCTAACTTTCAGTTGGATATGAATCAGACTACACTTGTTTTGCCTCCTCCGAGAACAGTGTCAGCTTCTCTCGATAGAGGTTTGTTGAATTTCGACGTACCGAGCGCGACACACATGATGTCCAAAGCGGACATCTCCAAA
TGGATGTCCG/- CGGCGGACTCTCCGTTCTGGTATCAGTCCGCCAATGAAGAGCACGCTGGATACACACCCGATTGCCTTATCCCGCGCTCACAGACAGCATACACCGCATTCTCCGGGTAAGAATGACCAATTATGAATTCTAAGCAACTTCAGGCGCAATTGCATTCATGTAAAGAGGTCGAATTAAAATGGCGTTTGTAGTTGTTGAGTATTGCGCTTATAATTATATGAGGCACACACATTTAGGGCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTATCAAAAAATGCATTTTAAAACTCTTTAAAAAAAGGTTTCATTAGTTGATATATTTACTAACATTAACTAATTATGAACAGTACTTGTACAGCATTTATTAGTCACAGTTAAACATTTAATAATGCATTATTAACACCCAAATTAATGCTTGTTAACATTAGTTAATCCATCATGTGTTAACATGAACTAACAATGATACTATGATAAACGTTTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None