Genomic Feature
ecu2
- ID
- ZDB-ALT-150717-3
- Name
- ecu2
- Synonyms
-
- Pgr35 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yong Zhu Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 18: 41819988 - 41820012 (GRCz11) (1) Details
- Nucleotide change
- GGCAGCGCGCCCGCATCGAGCAGCG/TTT
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 3 bp inserted / 25 bp deleted from position 142 to 166 (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- Polypeptide Truncation: from position 70 to 617 (1)
- Flanking Sequence
-
TGTAGAAAAGACTTGATTTTTAATTCTAAACTCTTGTCTTTACTTACAAACATATATTACAAAAATGTCAAGCAGGAACTTTATTAAGAAAGAAGACATATTTGTATACAACATTTAATATATTTGCCGCATTATGAAATACTGATATTCGTTTTTTTTGCGACCTGTTGCAAATATATTTCCAAAGATGTTGTTTTCATTTTAGGAATACGTCGCACACTTTTTGTACAGCCTCTCGCCACCAGGAGGAATACACACGGAGGGTTATACTGTACACTACAGATCACAACCTCCAAACAAACAAAGAGGACGCATCTCGGACGATTGCGTGATTTTAAAAAAACAAAACTAACATTAGAATGGACACGGTGAACACTTCTCCCGCTGATTCCACTGGGACGGTGACGGGAATGAGTCATTTAATGGAGAAATACACGGACTTGGGTTTTGGGCACGGCAGGGTCTCGCTGCGTAATTTTGGAGACGCGGGGACTTTACGC
GGCAGCGCGCCCGCATCGAGCAGCG/TTT ATGCTTTGGATCACCTTTCTGCGCTGGACTTGCCTCTCGGTACCAAACCTTACACTGAACACATAGACGACTTTCTAAAAGCAGAAACCGGACAGTGGAACGCAAAGACAGATTGTCCGGAGAGTTCGTATATTAAAGATGATAAGGAGCTAAATCTCATCATGGAGCCACCGAACCCTGATTTCGACATCACCGTGTTGGAAAGCTGCTACGACTCCACCGAGAGGAAACAACAGTGTGAGTTTATTGAGGAGTCCTCAGCTTTAATCTCATCTCAAGCGATCCAACAGGTGGTTGTGGACAGTTCCTCTAACTTTCAGTTGGATATGAATCAGACTACACTTGTTTTGCCTCCTCCGAGAACAGTGTCAGCTTCTCTCGATAGAGGTTTGTTGAATTTCGACGTACCGAGCGCGACACACATGATGTCCAAAGCGGACATCTCCAAATGGATGTCCGCGGCGGACTCTCCGTTCTGGTATCAGTCCGCCAATGAAGAG - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None