Transcript

tjp1a-004

ID

ZDB-TSCRIPT-160623-571

Name

tjp1a-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tjp1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173846 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173846.2|gene_biotype:protein_coding|ENSDARG00000077506.8 transcript_biotype:retained_intron gene_symbol:TJP1 cdna chromosome:GRCz11:7:30930653:30944908:1
GCCTGTTTTTCACTCGGATTTTACACTCACAGGATTTAGA
TGGGAATGAGGAAACAATGATGTTTCACACTCAAGGAAGA
AAAGCAAAACGCATACGGGCAGCTGCCAGGTACTATTTGC
AGCAACATGTCCCGATGTTTGCTACAGCAGTTATTGCACC
TGGGGATGTGGGAGCCCTTGTCAGGTCTGGCGGATGAAGG
TGTGATGACCTTTGACCAGCTGGACCGGTCAACCAGTGGG
AACATTTGTCCAGCATCTCTGCCTATTAAGCGAATGACTG
AGGTAATTGTAGATATAAAACACTGTATAGTATTTCTCAA
ATAGGATGTTTTATTTGTGTGTTGGACAAAAAATGAAAAT
ACAGTCAGCAAGCACTGTATATAACACAATACATGGTATG
TATGATGTTACATTTATAATATGCTAGTCTATTTTGGAAT
TATCTAAATCCTTGTCTTTTTGTATTCTGGGGAATGGGCA
GCCAGTGCTCTGTCTGATTTATCTCTATCTGCTTTCTCTC
AGTTCGTGCTCAAGTGTAGGGTCTGTTTCATTTTGGCCTC
ACTAAACAGCTACAGTCTTGTCCAAACACACAGCAAACGC
TGTTCTGCTCAATTCACGTTGTTCCTTTAATCCAGCTCTT
ACTGTATATGGTGCTCTGCTTTCCAGCGCTTTGATCTCCC
GTCATCCCTTCAGCAGTTTTACAGTTTAAGACTCCAGCTC
TAACTTGGCAGAGTCTGAACGCTTTTCTGAG

OTTDART00000063606 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000063606.1|ZDB-TSCRIPT-160623-571 cdna: chromosome:VEGA67:7:30659503:30673758:1 gene:OTTDARG00000029763.4 gene_biotype:protein_coding transcript_biotype:retained_intron gene_symbol:tjp1a description:tight junction protein 1a
GCCTGTTTTTCACTCGGATTTTACACTCACAGGATTTAGA
TGGGAATGAGGAAACAATGATGTTTCACACTCAAGGAAGA
AAAGCAAAACGCATACGGGCAGCTGCCAGGTACTATTTGC
AGCAACATGTCCCGATGTTTGCTACAGCAGTTATTGCACC
TGGGGATGTGGGAGCCCTTGTCAGGTCTGGCGGATGAAGG
TGTGATGACCTTTGACCAGCTGGACCGGTCAACCAGTGGG
AACATTTGTCCAGCATCTCTGCCTATTAAGCGAATGACTG
AGGTAATTGTAGATATAAAACACTGTATAGTATTTCTCAA
ATAGGATGTTTTATTTGTGTGTTGGACAAAAAATGAAAAT
ACAGTCAGCAAGCACTGTATATAACACAATACATGGTATG
TATGATGTTACATTTATAATATGCTAGTCTATTTTGGAAT
TATCTAAATCCTTGTCTTTTTGTATTCTGGGGAATGGGCA
GCCAGTGCTCTGTCTGATTTATCTCTATCTGCTTTCTCTC
AGTTCGTGCTCAAGTGTAGGGTCTGTTTCATTTTGGCCTC
ACTAAACAGCTACAGTCTTGTCCAAACACACAGCAAACGC
TGTTCTGCTCAATTCACGTTGTTCCTTTAATCCAGCTCTT
ACTGTATATGGTGCTCTGCTTTCCAGCGCTTTGATCTCCC
GTCATCCCTTCAGCAGTTTTACAGTTTAAGACTCCAGCTC
TAACTTGGCAGAGTCTGAACGCTTTTCTGAG

Related Transcripts

Transcripts related to tjp1a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tjp1a-201 (1) Ensembl	Ensembl	4,902 nt	Select Tool ZFIN BLAST
mRNA	tjp1a-202 (1) Ensembl	Ensembl	6,999 nt	Select Tool
mRNA	tjp1a-203 (1) Ensembl	Ensembl	676 nt	Select Tool
mRNA	tjp1a-204 (1) Ensembl	Ensembl	612 nt	Select Tool
mRNA	tjp1a-205 (1) Ensembl	Ensembl	485 nt	Select Tool
mRNA	tjp1a-206 (1) Ensembl	Ensembl	1,035 nt	Select Tool
mRNA	tjp1a-207 (1) Ensembl	Ensembl	544 nt	Select Tool
mRNA	tjp1a-209 (1) Ensembl	Ensembl	206 nt	Select Tool
mRNA	tjp1a-210 (1) Ensembl	Ensembl	784 nt	Select Tool
mRNA	tjp1a-211 (1) Ensembl	Ensembl	5,101 nt	Select Tool ZFIN BLAST
mRNA	tjp1a-212 (1) Ensembl	Ensembl	5,074 nt	Select Tool ZFIN BLAST
ncRNA	tjp1a-004	Ensembl	751 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations