Transcript

hoxc6b-202

ID

ZDB-TSCRIPT-160112-110

Name

hoxc6b-202 Nomenclature History

Previous Names

hoxc6b-001

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

hoxc6b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173139 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173139.2|gene_biotype:protein_coding|ENSDARG00000101954.3 transcript_biotype:protein_coding gene_symbol:hoxc6b cdna chromosome:GRCz11:11:2202987:2204754:1
GGGAAGAGAGGCCTAGGAAAAAAAAAGTGTTGTTTTTTAA
AGAAGAAGGGATGAATTCCTATTTTACGAACCCATCGCTG
TCGTGTCATTTAAACAGCGGTCAAGAAGTTCTACCCAGCG
TTGCCATCAGCTCGACAAACTATGACCCGGTGCGACATTT
TTCGCCATATGGCGCCGCCGTTGCCCAAAACCGGATATAC
TCCAATCCGTTCTATTCACACCAAGAAAACGTTATGTTTG
GGTCAAGCCGACCGTACGATTACGGATCAAATATGTTCTA
CCAGGACAAAGATGTGCTTCCAAGTTGCAGGCAAGGCTTT
GGGCAAACACAGGGTTCATTGACGCAGGATTACGCTTCAG
ACCAAGGCAAGACTATGGAACCGAAAGGAAGTGTTCAAAT
ATATCCATGGATGCAGCGGATGAACTCGCATAGAGTTGGC
TATGGGTCTGACAGACGGCGAGGTCGCCAAATCTATTCGC
GATACCAAACTTTAGAACTTGAGAAAGAATTTCATTACAA
TCGCTATTTGACAAGACGCAGACGAATTGAGATTGCCAAC
ACATTGTGTCTGTCGGAACGCCAGATTAAAATTTGGTTTC
AGAACCGCCGGATGAAATGGAAGAAGGAGAGCAATCTCAC
GTCCATCCTCAATGACAATGGCTCGGTAGGAGCTGGCCAA
GACACGGACAAAGAAGAAACAGGGGAAACCGCCGAAAAAG
ATGAGCATGACTGATTGACTTACTAACTAATTAAAAGACA
TTCCGTTTGAAAACGTTCTTACATAACTAAGCTACCTATG
GAATTTACACAATTTGCACAATTAAAACCAAAAACTGTTA
CAATTCCTTTAGATGCAAAGCGTGTGTTGCTTCGCCACTT
ATTTCACTATGATTCTGAAAAGCTGTTTATCCAGAGCAAT
TTAATTCATAAATCAGTGCTCTGACTGAAAATGTTTTACC
TATCTTGTGTGATTTAATCTTGTCATTAAACATCTTATTT
GTTCTGATGTACTCTGAAGTGCAAATAAGGGACTGTTGAT
GTAGACCAAATATGAAAATTCCAAATATTAAACTACAATC
ATTTCTTCTGGTCCTAGGAAGTGCATTGTACATGTTTGTA
AATATGAGATTCAAATACTTTTGATGAGCATTTGTTTAGA
TTGACGTACTGTTTTGTGTTTTTTCTTTACTTTGTGATGC
GTTCTGGGAGAACCACATACGTTGTAAAAAGTATCCTTCA
TTACTCTTTTTTTCCAAATGTTGAATTTTAGCAAAAAAGC
AAGATAATAAAATGTTCGAACATTTACGCAATAAAGTTGT
AATCAATATAACAAT

OTTDART00000062602 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062602|OTTDARG00000043225| hoxc6b|no_translation hoxc6b-001 LG_1 CABZ01085067.1 Danio rerio protein_coding KNOWN, 1128 bp
GGGAAGAGAGGCCTAGGAAAAAAAAAGTGTTGTTTTTTAA
AGAAGAAGGGATGAATTCCTATTTTACGAACCCATCGCTG
TCGTGTCATTTAAACAGCGGTCAAGAAGTTCTACCCAGCG
TTGCCATCAGCTCGACAAACTATGACCCGGTGCGACATTT
TTCGCCATATGGCGCCGCCGTTGCCCAAAACCGGATATAC
TCCAATCCGTTCTATTCACACCAAGAAAACGTTATGTTTG
GGTCAAGCCGACCGTACGATTACGGATCAAATATGTTCTA
CCAGGACAAAGATGTGCTTCCAAGTTGCAGGCAAGGCTTT
GGGCAAACACAGGGTTCATTGACGCAGGATTACGCTTCAG
ACCAAGGCAAGACTATGGAACCGAAAGGAAGTGTTCAAAT
ATATCCATGGATGCAGCGGATGAACTCGCATAGTGGAGTT
GGCTATGGGTCTGACAGACGGCGAGGTCGCCAAATCTATT
CGCGATACCAAACTTTAGAACTTGAGAAAGAATTTCATTA
CAATCGCTATTTGACAAGACGCAGACGAATTGAGATTGCC
AACACATTGTGTCTGTCGGAACGCCAGATTAAAATTTGGT
TTCAGAACCGCCGGATGAAATGGAAGAAGGAGAGCAATCT
CACGTCCATCCTCAATGACAATGGCTCGGTAGGAGCTGGC
CAAGACACGGACAAAGAAGAAACAGGGGAAACCGCCGAAA
AAGATGAGCATGACTGATTGACTTACTAACTAATTAAAAG
ACATTCCGTTTGAAAACGTTCTTACATAACTAAGCTACCT
ATGGAATTTACACAATTTGCACAATTAAAACCAAAAACTG
TTACAATTCCTTTAGATGCAAAGCGTGTGTTGCTTCGCCA
CTTATTTCACTATGATTCTGAAAAGCTGTTTATCCAGAGC
AATTTAATTCATAAATCAGTGCTCTGACTGAAAATGTTTT
ACCTATCTTGTGTGATTTAATCTTGTCATTAAACATCTTA
TTTGTTCTGATGTACTCTGAAGTGCAAATAAGGGACTGTT
GATGTAGACCAAATATGAAAATTCCAAATATTAAACTACA
ATCATTTCTTCTGGTCCTAGGAAGTGCATTGTACATGTTT
GTAAATAT

Related Transcripts

Transcripts related to hoxc6b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hoxc6b-201 (1) Ensembl	Ensembl	1,420 nt	Select Tool
mRNA	hoxc6b-203 (1) Ensembl	Ensembl	781 nt	Select Tool ZFIN BLAST
ncRNA	hoxc6b-202	Ensembl	1,335 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations