Transcript

al844185.1-201

ID

ZDB-TSCRIPT-131113-1409

Name

al844185.1-201 Nomenclature History

Previous Names

dkey-30h22.13-001
ottdart00000059394

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nexn (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149613 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149613.2|gene_biotype:protein_coding|ENSDARG00000095868.3 transcript_biotype:nonsense_mediated_decay  cdna chromosome:GRCz11:8:18515040:18519121:-1
AGGATGAAGATGAGGACAAAACATCCCCAGCTAAAGCAGA
AGACGTCCCGTTCAGACAGAAAGTGGACATGCGTGCACGG
TTCGAACAAATGGCAAAGGCCCGAGAAGAGGAGCAGAAGA
GAAAAATCGAAGAGCAGAAATTACAAAGGATGCAATTCGA
GCAACAGGAAATTGACGCCGCTCTCCAAAAAAAAAAGGAC
GAAGAGGAGGAAGAAGAGGGAAGTATTATCAATGGGTCTG
CTGCCTACGAGGACGAAGAGGACCATGCCAGGTCGGGTGC
TCCGTGGTTCAAAAAGCCCCTGAAGAACCAGTCTGTGGTT
GACGCTGAGCCTGTGCGGTTTACAGTGAAGATCACGGGGG
AACCCAAACCAGAGGTCACCTGGTGGTTTGAGGGTGAGCC
GCTGCCAGACTCTGAAGATTATCAGTACATCGAAAGAGGT
GAAACCTACTGCCTGTACCTGCCGGAAACGTTCCCGGAGG
ATGAAGGAGAGTACATGTGCAAAGCCGTCAACAGCCGAGG
CACCGCCGCCAGCACCTGCATTCTTACCATTGAAAGGCCT
CAAGAAAACCATAGCTTGCATGGATGAAGAACTTCCACGA
ACTCATTCAAGCGTCAATAACAGATCAGACCTGCGGAGTA
TACTTCATCTTGAGGGCCTTTACAAAAAGAATAAGGCAGA
AGAGCATCCTTTGAAGTCAATGTTAGAGATGATTGTGAAG
GACAGAATGAGTGAAGGTGGAAAAACCAAAGGTCATCGAC
AAGGTGACGTTCAAGCACATGCATTGGATCAAACCATGTC
CAGTTCTTCCATAGATATGACTGAGACTATTAAGAGAGAT
GAAAGTTGTTTGCACAATCTCTCGTCGAACAATCCAAGGT
ATTTGAATAATTAAAATCTACTGTAGA

OTTDART00000059394 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000059394|OTTDARG00000041175|ZDB-GENE-041114-92 nexn|OTTDARP00000046304 DKEY-30H22.13-001 LG_ AL844185.9 Danio rerio protein_coding NOVEL, 907 bp
AGGATGAAGATGAGGACAAAACATCCCCAGCTAAAGCAGA
AGACGTCCCGTTCAGACAGAAAGTGGACATGCGTGCACGG
TTCGAACAAATGGCAAAGGCCCGAGAAGAGGAGCAGAAGA
GAAAAATCGAAGAGCAGAAATTACAAAGGATGCAATTCGA
GCAACAGGAAATTGACGCCGCTCTCCAAAAAAAAAAGGAC
GAAGAGGAGGAAGAAGAGGGAAGTATTATCAATGGGTCTG
CTGCCTACGAGGACGAAGAGGACCATGCCAGGTCGGGTGC
TCCGTGGTTCAAAAAGCCCCTGAAGAACCAGTCTGTGGTT
GACGCTGAGCCTGTGCGGTTTACAGTGAAGATCACGGGGG
AACCCAAACCAGAGGTCACCTGGTGGTTTGAGGGTGAGCC
GCTGCCAGACTCTGAAGATTATCAGTACATCGAAAGAGGT
GAAACCTACTGCCTGTACCTGCCGGAAACGTTCCCGGAGG
ATGAAGGAGAGTACATGTGCAAAGCCGTCAACAGCCGAGG
CACCGCCGCCAGCACCTGCATTCTTACCATTGAAAGGCCT
CAAGAAAACCATAGCTTGCATGGATGAAGAACTTCCACGA
ACTCATTCAAGCGTCAATAACAGATCAGACCTGCGGAGTA
TACTTCATCTTGAGGGCCTTTACAAAAAGAATAAGGCAGA
AGAGCATCCTTTGAAGTCAATGTTAGAGATGATTGTGAAG
GACAGAATGAGTGAAGGTGGAAAAACCAAAGGTCATCGAC
AAGGTGACGTTCAAGCACATGCATTGGATCAAACCATGTC
CAGTTCTTCCATAGATATGACTGAGACTATTAAGAGAGAT
GAAAGTTGTTTGCACAATCTCTCGTCGAACAATCCAAGGT
ATTTGAATAATTAAAATCTACTGTAGA

Related Transcripts

Transcripts related to nexn

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	al844185.1-201	Ensembl	907 nt
mRNA	nexn-201 (1) Ensembl	Ensembl	2,442 nt	Select Tool ZFIN BLAST
mRNA	nexn-202 (1) Ensembl	Ensembl	3,338 nt	Select Tool
mRNA	nexn-204 (1) Ensembl	Ensembl	785 nt	Select Tool
mRNA	nexn-206 (1) Ensembl	Ensembl	987 nt	Select Tool
mRNA	nexn-208 (1) Ensembl	Ensembl	4,774 nt	Select Tool ZFIN BLAST
mRNA	nexn-209 (1) Ensembl	Ensembl	4,726 nt	Select Tool ZFIN BLAST
ncRNA	nexn-002 (1) Ensembl	Ensembl	653 nt	Select Tool
ncRNA	nexn-005 (1) Ensembl	Ensembl	819 nt	Select Tool
ncRNA	nexn-006 (1) Ensembl	Ensembl	361 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations