Transcript

tube1-202

ID
ZDB-TSCRIPT-121213-231
Name
tube1-202 Nomenclature History
Previous Names
  • tube1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000064565 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000064565.5|gene_biotype:protein_coding|ENSDARG00000096620.4 transcript_biotype:nonsense_mediated_decay gene_symbol:tube1 cdna chromosome:GRCz11:20:263056:277689:1
TGTTTAGAAGCTCTTGTGAGGATGCCAGACGCCGCTTAGA
ACCAAGACGAGGAAAAAGACACTGCTGAGATGGCGATGTA
ACTTAACCAATGTCAGTTGAACTAAAATGGTGTAAACCAC
TGATCTCCGACTTGTCTGTTATACATGAGTGTGTAAAATA
AAGAGATGACGCAGTCTGTCGTAGTCCAAGTTGGTCAGTG
TGGGAATCAGGTGGGCTGCCGCTTCTGGGATCTCGCACTC
AGAGAACATGCACACGTGAATCAAATGGGAGTTTATGATG
ACGCGCTGAGCAGCTTCTTTAGGAACGTTGACCAGAGGAG
AGGGTACGGAGCAGAGGCAACCGGCGGCAAGATCACAGGT
CTGAAGGCCAGGGCCGTGTTAGTGGATATGGAGGAGGGAG
TGCTTGGAGGGATTCTGCAGGGGCCGTTGCGTTCTCTCTT
CAGCAGCGCACAGCTCATAAGCGATGTCTCTGGTTCAGGG
AATAACTGGGCAGTCGGGCACCACACATATGGTTTGGCCT
ACAGAGAGCAGATCGTGGATCAGGTTCGCAAGGCTGCAGA
ACACTGTGACTGCCTTCAGTGCTTCTTCCTTATTCACTCC
ATGGGGGGAGGAACTGGTTCAGGGTTAGGCACGTTTGTGT
TGAAGCTTCTAGAAGAGGAGTTCCCAGAGGTGTATCGGAT
CGTGACCTCCGTTTACCCCACTGCAGAAGATGATGTCATC
ACTTCTCCTTACAACAGCGTCCTAGCCATGAAAGAACTCA
CAGAACATGCAGACTGCGTCCTGCCGGTCGACAACCAGTC
TCTGGTTGATATTGTCGGTAAGATAAAACACATGTCCAAC
ACTGGCAAACCAGGCTGTGCTATCAAGAAGGACAGTACCA
TCATCTCTGGACAAGGAGGGGTGGTGAAGGTGGAGAAGCC
CTTTGATGCCATGAACAACATTGTGGCCAATCTGCTTCTT
AATATTACCAGCGCGGTTTGAGGGCTCTCTCAACATGGAT
CTGAATGAGATAGCCATGAACCTGGTCCCTTTCCCACGTT
TACACTACCTTGTGTCCAGCCTGACTCCTCTCTACACACT
GGCTGATGTCAGTGTGCCACCCCGCAGGCTGGATCAGATG
TTCTCGGATGCGTTCAGTAAGGAGCATCAGCTGATCAGAG
CCGACCCCAAACACAACCTGTATCTGGCCTGTGCACTCAT
GCTGCGTGGAAACGTTCAGCTGTCGGACCTGCGGCGGAAC
ATTGAGAGGCTGAGGCCCACCCTGCCGTTTGTCCCATGGA
ATCAGGAAGGATGGAAGACCAGCCTGTGTTCTGTCCTGCC
TGTGGGTCACTCACATTCTCTGCTGGCCTTAGCCAACAAC
ACTTGTGTGAAGTCCACCTTTTCTGAACTGAGGGAACGCT
TTATGAAGCTCTACCGTAGGAAGGCTCATTTGCATCATTA
TCTAGCCGTTGATGGCATGGAGCAGTCTGGATTCACTGAA
GCGCTGTCATCAATCTCAACACTTATTGAAGACTACACAC
ACCTGGAATGCCCTCTCATGCCAAACGCCCCCAGACTCAC
CATGGCCACCTGACCTATCAAGTGCAGCTCTGAAAACATG
TCATCAGCGTTACTGCACTTCCTCTGACACACGCAGGACG
TGATCCACTGCATCTTCCAGCGCACATTGGATCCTCCTTT
GCAGTGGAACTCGACGTTCACCATTTTGGACTTATTGGGA
ACGCAGCAGCGCTTGTCTGTGCAGACGCCGCAGTATGTCG
GCCGGTGCTTCTTAACGCTGGTGCAGCCGGACAGTGAGAG
CTTCTCTGCTTTACTGGCCTGGAATTTGGGTTTGCAGGTT
TTCCCTTTTGGCATCTATGCAGGACAGAGAGGAGTTTCAG
TACAATCATTTAACTCCAAATGATCAACTAGAAGTCGAGT
TATTATGTGTTGCTCTTACAGCTGGGATCCACCACTAGAC
TTTCTCAGGCAGTGTGTATTAAATGCCGGTTTGGCTGTGT
TTAA

OTTDART00000057958 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000057958|OTTDARG00000004076|ZDB-GENE-040426-1174 tube1|OTTDARP00000045389 tube1-002 LG_ AL954744.8 Danio rerio protein_coding KNOWN, 2004 bp
TGTTTAGAAGCTCTTGTGAGGATGCCAGACGCCGCTTAGA
ACCAAGACGAGGAAAAAGACACTGCTGAGATGGCGATGTA
ACTTAACCAATGTCAGTTGAACTAAAATGGTGTAAACCAC
TGATCTCCGACTTGTCTGTTATACATGAGTGTGTAAAATA
AAGAGATGACGCAGTCTGTCGTAGTCCAAGTTGGTCAGTG
TGGGAATCAGGTGGGCTGCCGCTTCTGGGATCTCGCACTC
AGAGAACATGCACACGTGAATCAAATGGGAGTTTATGATG
ACGCGCTGAGCAGCTTCTTTAGGAACGTTGACCAGAGGAG
AGGGTACGGAGCAGAGGCAACCGGCGGCAAGATCACAGGT
CTGAAGGCCAGGGCCGTGTTAGTGGATATGGAGGAGGGAG
TGCTTGGAGGGATTCTGCAGGGGCCGTTGCGTTCTCTCTT
CAGCAGCGCACAGCTCATAAGCGATGTCTCTGGTTCAGGG
AATAACTGGGCAGTCGGGCACCACACATATGGTTTGGCCT
ACAGAGAGCAGATCGTGGATCAGGTTCGCAAGGCTGCAGA
ACACTGTGACTGCCTTCAGTGCTTCTTCCTTATTCACTCC
ATGGGGGGAGGAACTGGTTCAGGGTTAGGCACGTTTGTGT
TGAAGCTTCTAGAAGAGGAGTTCCCAGAGGTGTATCGGAT
CGTGACCTCCGTTTACCCCACTGCAGAAGATGATGTCATC
ACTTCTCCTTACAACAGCGTCCTAGCCATGAAAGAACTCA
CAGAACATGCAGACTGCGTCCTGCCGGTCGACAACCAGTC
TCTGGTTGATATTGTCGGTAAGATAAAACACATGTCCAAC
ACTGGCAAACCAGGCTGTGCTATCAAGAAGGACAGTACCA
TCATCTCTGGACAAGGAGGGGTGGTGAAGGTGGAGAAGCC
CTTTGATGCCATGAACAACATTGTGGCCAATCTGCTTCTT
AATATTACCAGCGCGGTTTGAGGGCTCTCTCAACATGGAT
CTGAATGAGATAGCCATGAACCTGGTCCCTTTCCCACGTT
TACACTACCTTGTGTCCAGCCTGACTCCTCTCTACACACT
GGCTGATGTCAGTGTGCCACCCCGCAGGCTGGATCAGATG
TTCTCGGATGCGTTCAGTAAGGAGCATCAGCTGATCAGAG
CCGACCCCAAACACAACCTGTATCTGGCCTGTGCACTCAT
GCTGCGTGGAAACGTTCAGCTGTCGGACCTGCGGCGGAAC
ATTGAGAGGCTGAGGCCCACCCTGCCGTTTGTCCCATGGA
ATCAGGAAGGATGGAAGACCAGCCTGTGTTCTGTCCTGCC
TGTGGGTCACTCACATTCTCTGCTGGCCTTAGCCAACAAC
ACTTGTGTGAAGTCCACCTTTTCTGAACTGAGGGAACGCT
TTATGAAGCTCTACCGTAGGAAGGCTCATTTGCATCATTA
TCTAGCCGTTGATGGCATGGAGCAGTCTGGATTCACTGAA
GCGCTGTCATCAATCTCAACACTTATTGAAGACTACACAC
ACCTGGAATGCCCTCTCATGCCAAACGCCCCCAGACTCAC
CATGGCCACCTGACCTATCAAGTGCAGCTCTGAAAACATG
TCATCAGCGTTACTGCACTTCCTCTGACACACGCAGGACG
TGATCCACTGCATCTTCCAGCGCACATTGGATCCTCCTTT
GCAGTGGAACTCGACGTTCACCATTTTGGACTTATTGGGA
ACGCAGCAGCGCTTGTCTGTGCAGACGCCGCAGTATGTCG
GCCGGTGCTTCTTAACGCTGGTGCAGCCGGACAGTGAGAG
CTTCTCTGCTTTACTGGCCTGGAATTTGGGTTTGCAGGTT
TTCCCTTTTGGCATCTATGCAGGACAGAGAGGAGTTTCAG
TACAATCATTTAACTCCAAATGATCAACTAGAAGTCGAGT
TATTATGTGTTGCTCTTACAGCTGGGATCCACCACTAGAC
TTTCTCAGGCAGTGTGTATTAAATGCCGGTTTGGCTGTGT
TTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations