Gene

tube1

ID
ZDB-GENE-040426-1174
Name
tubulin, epsilon 1
Symbol
tube1 Nomenclature History
Previous Names
  • zgc:63582
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have GTP binding activity. Predicted to be involved in microtubule cytoskeleton organization and mitotic cell cycle. Predicted to localize to cytoplasm and microtubule. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; nervous system; pronephric duct; and pronephric mesoderm. Orthologous to human TUBE1 (tubulin epsilon 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tube1 Human Ortholog
No data available
Associated With tube1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017975 Tubulin, conserved site
Domain IPR003008 Tubulin/FtsZ, GTPase domain
Domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
Family IPR000217 Tubulin
Family IPR004057 Epsilon tubulin
Homologous_superfamily IPR008280 Tubulin/FtsZ, C-terminal
Homologous_superfamily IPR023123 Tubulin, C-terminal
Homologous_superfamily IPR036525 Tubulin/FtsZ, GTPase domain superfamily
Domain Details Per Protein
Protein Length Epsilon tubulin Tubulin Tubulin, conserved site Tubulin, C-terminal Tubulin/FtsZ, 2-layer sandwich domain Tubulin/FtsZ, C-terminal Tubulin/FtsZ, GTPase domain Tubulin/FtsZ, GTPase domain superfamily
UniProtKB:Q5SNS3 470
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript tube1-201 (1) Ensembl 2,388 nt
aberrant processed transcript tube1-202 (1) Ensembl 2,004 nt
mRNA ottdart00000004233 (1) Havana 798 nt
mRNA tube1-203 (1) Ensembl 2,009 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations