Transcript

pabpc1b-204

ID

ZDB-TSCRIPT-120213-580

Name

pabpc1b-204 Nomenclature History

Previous Names

pabpc1b-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

pabpc1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000151056 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000151056.2|gene_biotype:protein_coding|ENSDARG00000021140.12 transcript_biotype:nonsense_mediated_decay gene_symbol:pabpc1b cdna chromosome:GRCz11:19:12134847:12145765:-1
TCTCCCGAAACCCCCGGCTGTTAGTGCTGTGTGAGTGCGT
GTGTGCTCCGGAGCTTGCCTCGGCACACATTATATAAAAA
ATAAAAAAATACAAAAAAATTAAAAAACTTTTAAAAACTC
CAAAAAATCCTTTTTTTCTTTTTTTTTATAAATATAAATC
GGTGAAGTGGGAACCGGAGGCCTTGAAACATCGCAACAGC
CCAGAAAGAAAAAAAAATAACGACATTCTGTGAGCTCGCG
AAGGCCTAACGTTAGCGGTTTGCTTGATTCGTTTAATATT
TCTGCGCGTTTTATTTTATTTGTCCTTAATTTTCGTCATA
TTAAACGACCAACCGCCTGAACCCCTCCTGCGAAGTCATC
TTTTACCCGACGGATGTAAGTTTTAACAATTGGCGTTTTA
AAATTAGCTTGACAGACAACTAACGTTATATTCTGACGTG
GTTGAAACATAACGTACACGAAATTTAGCGAGTTCACTAC
TGCGACTGAGGAGAAAATGAACCCCAGCGCTCCTAGTTAC
CCCATGGCCTCCCTCTATGTCGGGGACCTGCACCAGGACG
TGACTGAAGCCATGCTGTACGAGAAGTTCAGTCCGGCCGG
TGCCATCCTCTCCATCCGCGTGTGCAGGGATATGATCACT
CGCAGGTCGCTCGGTTATGCCTATGTCAACTTCCAGCAGC
CTGCAGACGCTGAACGGGCTCTAGACACAATGAACTTTGA
TGTCATCAAAGGTAGACCTGTCCGCATTATGTGGTCTCAG
CGTGACCCTTCTCTGAGGAAGAGCGGCGTCGGAAACATCT
TCATTAAAAATCTGGATAAGTCTATTGACAACAAAGCTCT
TTATGACACCTTCTCAGCGTTTGGCAACATCTTGTCATGC
AAGGTTTGTCGGCCGCTTCAAGTCTCGCAAGGAGAGGGAG
GCTGAGCTTGGTGCAAGAGCCAAAGAGTTTACCAACGTCT
ACATTAAAAACTTTGGAGAAGACATGGATGATGACAAACT
TAAGGATATCTTCAGCAAATATGGTAATGCCATGAGCATC
CGTGTCATGACTGATGAAAATG

OTTDART00000053613 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053613|OTTDARG00000029320|ZDB-GENE-050308-1 pabpc1b|OTTDARP00000042163 pabpc1b-004 LG_none CU468682.8,CU468824.8 Danio rerio protein_coding KNOWN, 1062 bp
TCTCCCGAAACCCCCGGCTGTTAGTGCTGTGTGAGTGCGT
GTGTGCTCCGGAGCTTGCCTCGGCACACATTATATAAAAA
ATAAAAAAATACAAAAAAATTAAAAAACTTTTAAAAACTC
CAAAAAATCCTTTTTTTCTTTTTTTTTATAAATATAAATC
GGTGAAGTGGGAACCGGAGGCCTTGAAACATCGCAACAGC
CCAGAAAGAAAAAAAAATAACGACATTCTGTGAGCTCGCG
AAGGCCTAACGTTAGCGGTTTGCTTGATTCGTTTAATATT
TCTGCGCGTTTTATTTTATTTGTCCTTAATTTTCGTCATA
TTAAACGACCAACCGCCTGAACCCCTCCTGCGAAGTCATC
TTTTACCCGACGGATGTAAGTTTTAACAATTGGCGTTTTA
AAATTAGCTTGACAGACAACTAACGTTATATTCTGACGTG
GTTGAAACATAACGTACACGAAATTTAGCGAGTTCACTAC
TGCGACTGAGGAGAAAATGAACCCCAGCGCTCCTAGTTAC
CCCATGGCCTCCCTCTATGTCGGGGACCTGCACCAGGACG
TGACTGAAGCCATGCTGTACGAGAAGTTCAGTCCGGCCGG
TGCCATCCTCTCCATCCGCGTGTGCAGGGATATGATCACT
CGCAGGTCGCTCGGTTATGCCTATGTCAACTTCCAGCAGC
CTGCAGACGCTGAACGGGCTCTAGACACAATGAACTTTGA
TGTCATCAAAGGTAGACCTGTCCGCATTATGTGGTCTCAG
CGTGACCCTTCTCTGAGGAAGAGCGGCGTCGGAAACATCT
TCATTAAAAATCTGGATAAGTCTATTGACAACAAAGCTCT
TTATGACACCTTCTCAGCGTTTGGCAACATCTTGTCATGC
AAGGTTTGTCGGCCGCTTCAAGTCTCGCAAGGAGAGGGAG
GCTGAGCTTGGTGCAAGAGCCAAAGAGTTTACCAACGTCT
ACATTAAAAACTTTGGAGAAGACATGGATGATGACAAACT
TAAGGATATCTTCAGCAAATATGGTAATGCCATGAGCATC
CGTGTCATGACTGATGAAAATG

Related Transcripts

Transcripts related to pabpc1b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	pabpc1b-204	Ensembl	1,062 nt
mRNA	pabpc1b-201 (1) Ensembl	Ensembl	2,804 nt	Select Tool
mRNA	pabpc1b-203 (1) Ensembl	Ensembl	742 nt	Select Tool
ncRNA	pabpc1b-003 (1) Ensembl	Ensembl	529 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations