Transcript

itsn1-003

ID

ZDB-TSCRIPT-110912-875

Name

itsn1-003 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

itsn1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000150545 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000150545.2|gene_biotype:protein_coding|ENSDARG00000000086.12 transcript_biotype:processed_transcript gene_symbol:itsn1 cdna chromosome:GRCz11:1:47066493:47089818:-1
CTAGCGAAGCTGCACAGAGGAAACGAGGAGCCACACAAGC
AGCAGCCAAATAACGCCTGGAATTTACCTCGAGCGTCAAA
AAAGGACAGAAGAGCCTCCGCCTGTCACCTCATGCCCCTT
TAGTTGATTCCCTCGCAGAGTGCTGGAGTCATAATGGAAA
CTGAATGATGAGGTGTTTGCGGCTGGACGGCAGCTGACGG
ACTGAACCATGGCTCAGTTTCCCACACCCTTCGGAGGGGG
GTCGGATACATGGGTAATATCTGTGGACGAGAGAGCCAAA
CATGACCAGCAGTTTCACAGTCTCACCCCAACACCCGCTG
GCTTCATCACAGGTAATCACCGCTGCTTTTCTCGCTGTGA
GACTGAATGAGCTTTCATCCGAGCTGATGGTTGGTGAAAC
CCTTTGGAGTTAAGTCAGAAATGTGGGAACAAATTATTCT
GAGTTCTGTGCAATCGCAAATGACCACCAGCAGTGCAGAC
TGTCAAATGTTGTTGGTTGGTTTTGGATATTATTTCTATG
TTGGACACACAAACACAGAGATGTGGAGCAAATGAGGCAA
ACACTGAATAACAGAAGTAACCTTTTTCCCATCTTCCTTT
ATTTTTTTAAATGCATACCCCATGCTAATAAAAATTCCAC
AGAG

OTTDART00000052470 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000052470|OTTDARG00000008343|ZDB-GENE-030616-226 itsn1|no_translation itsn1-003 LG_none BX470235.7,BX005416.7 Danio rerio protein_coding KNOWN, 644 bp
CTAGCGAAGCTGCACAGAGGAAACGAGGAGCCACACAAGC
AGCAGCCAAATAACGCCTGGAATTTACCTCGAGCGTCAAA
AAAGGACAGAAGAGCCTCCGCCTGTCACCTCATGCCCCTT
TAGTTGATTCCCTCGCAGAGTGCTGGAGTCATAATGGAAA
CTGAATGATGAGGTGTTTGCGGCTGGACGGCAGCTGACGG
ACTGAACCATGGCTCAGTTTCCCACACCCTTCGGAGGGGG
GTCGGATACATGGGTAATATCTGTGGACGAGAGAGCCAAA
CATGACCAGCAGTTTCACAGTCTCACCCCAACACCCGCTG
GCTTCATCACAGGTAATCACCGCTGCTTTTCTCGCTGTGA
GACTGAATGAGCTTTCATCCGAGCTGATGGTTGGTGAAAC
CCTTTGGAGTTAAGTCAGAAATGTGGGAACAAATTATTCT
GAGTTCTGTGCAATCGCAAATGACCACCAGCAGTGCAGAC
TGTCAAATGTTGTTGGTTGGTTTTGGATATTATTTCTATG
TTGGACACACAAACACAGAGATGTGGAGCAAATGAGGCAA
ACACTGAATAACAGAAGTAACCTTTTTCCCATCTTCCTTT
ATTTTTTTAAATGCATACCCCATGCTAATAAAAATTCCAC
AGAG

Related Transcripts

Transcripts related to itsn1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	itsn1-002 (1)	Havana	4,622 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	itsn1-201 (1) Ensembl	Ensembl	5,681 nt	Select Tool
mRNA	itsn1-204 (1) Ensembl	Ensembl	5,191 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000003965 (1)	Havana	5,197 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	itsn1-003	Ensembl	644 nt
ncRNA	ottdart00000009539 (1) Ensembl	Ensembl	3,923 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations