Transcript

rxfp2b-204

ID
ZDB-TSCRIPT-110325-2692
Name
rxfp2b-204 Nomenclature History
Previous Names
  • rxfp2b-001
  • dkey-1o1.1-001
  • si:dkey-1o1.1-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000149645 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000149645.3|gene_biotype:protein_coding|ENSDARG00000019660.10 transcript_biotype:nonsense_mediated_decay gene_symbol:rxfp2b cdna chromosome:GRCz11:15:31735931:31772657:1
CAATGAGGTCGCTTCAGTCTGCTGCGACCGCGTCTGCACT
GGAGTTATGTTTGATACTTTTCACTACATCAATAACAACA
GCCAAAGCAGGGCAGGAACACAGGCCTTCTGAAGACTGTC
CGCTCGGTCACTTTCCATGTGGCAATGTGAGCATTTGTCT
GCCACAGGTACTGCACTGCAATAACCAGAAAGACTGTCCC
AATGGAGCTGATGAGGACAACTGTGGGGATAACAGTGGCT
GGGCTGACCTCTTCGACCGGACATTTAAACGGGGTTATCT
TCAAGAGCTTGCCACTGACTGCCAAGTGGAGCAGTACCCT
GATGTGTGCCGCTGCATAAACACTGAGATCCACTGCGTGC
ATGCCAGCTTGAGATCCATTCCACAGGTGTCAGCGAATGT
TACCTCCCTGTCATTGAAGAGCAACAAGATTCGAACACTA
CCTGATGAAGCCTTCATCAAATATATAAAACTGCAAAGGC
TGTTTCTCCAAGATAATTGCATCAACACTGTTTCCATTCA
GGCTTTCAGTGGACTGTATAAGCTACAAAAACTATCTTTA
AGCCAGAACTCCATCTCCTTGCTTTCCCCTGGAGTGTTCA
GAGATCTTCGTAAACTTAAGTGGTTGATTTTGGACGACAA
TCCCATAACAACAATTGCAGCCAACACATTTGCTGGCCTA
AGCTCCCTCTTCTTCCTGTCAATGGTGAACACTTCTTTAG
AAGCCCTTCCTTCTGCCAGACTCTGTGCCCATATGCCCTT
TCTCAGCTGGCTGGATTTCGAGGGTAATAGCATCACGACT
TTGGGCTTGTCAACTTTGCTAGACTGTGAACATCTGACTG
TGCTGTCACTGCGAGCCAATCTTATCAAGAGTTTGCCAGA
AAACACCTTCCAATCATTGCGCATGATGGGGGACCTGGAT
CTCTCTAATAATTCGATAAAGGAACTGCCAGTCGGTATTT
TCAAGGATTTACGGTCATTGCAAAGTCTAAATCTGTCCCA
AAACCCACTGGACCACATCCACCCTGGCCAGTTTAATCAT
CTAATTCAGCTCCAGTCTCTTGGCCTGGAGGGAGTGGAGA
TCCCAAATATACAGACAAGCATGTTCCGGCCCATGGATAA
CCTCTCCTACATATACTTCAAGAAGTTCCAGTACTGTTCT
TACGCCCCTCATGTCCGGAAGTGTAAACCCAACTCAGACG
GCCTGTCATCTTTTGAAGATCTGCTTGCTAATGTGGTTCT
TCGTGTGTCCGTGTGGGTCATGGCTTTTATCACCTGCTTT
GGGAACCTCTTTGTCATCGGTATGAGGACAGTCCTGCGGG
CTGAAAACAACCTGCATGCCTTCTGCATCAAGGTTTTGTG
CTGTGAGTACCAGAGGTGCAGATTGCCTAATGGGGGTCTA
TTTGTTTTTTGTGGGGATCTTTGATGTGAAGTTTCGTGGC
GAGTACAATAAGAATGCCAAGGTTTGGATGGAGAGTCTGG
AGTGTCGGACCATCGGGTTTCTGGCCATGCTTTCCTCTGA
GGTTTCCGTCATGCTGCTCACTTACTTGACTCTGGAGAAA
TTCCTGGTCATCGTTTTTCCCTTCAGCCACCTGCGACCGA
GCAAGTGCCAAACATTCACCGTCCTGGTCTCTATATGGCT
GCTGGGCATCTCTATAGCAGCCGTGCCGCTGCTTAATGAG
GATACGTTTGGGAATTACTATGGACTCAATGGAGTGTGTT
TCCCACTTCACTCAGAGCGTCTGGAAAAGCCTGTCGCAAA
AGGATATTCCACTGGGATTTTTCTTGGACTTAACCTGCTG
GCTTTCCTCATCATCGTGGTCTCGTACTCCAGCATGTTTT
ACTCCATCTATAAGACGGGCATCAGAGCCACAGAGCTGCC
GGGTCGACTGCACAGAGACGTGGCCATGGCACACCGCTTC
TTCTTCATCGTGTTTTCTGATGCCCTCTGCTGGATTCCCA
TATTCATGGTCAAAATCCTCTCTCTACTGGAGGTGGAGAT
ACCAGGAACCATCACATCTTGGGTGGTGATCTTCATCCTG
CCCATCAACAGTGCCTTAAACCCCATCCTTTACACACTGA
CCACCAGTTTTTTCAGAGAGCAGGTGGAACATTTATGGGG
ACACTGGCAGAGACAACCAAGACTCAAACAGGGCCGCAAA
AGCCTTACCAGCTCTGTCATCTACATGGACCCCTCGAGAC
CTTCGTTCTACCACCGCAGCTACATCCCACACTCCTCAAT
CTTAGACATTGATGCCAGTTACAGATGAAGATACTGTATG
GTATAATATCATGGCTATTGCATTAATCTGTAGTGGATCT
GCAGAGTTTCCGAAGTGCTGGAAATCCTAAACATAAGGTC
CTGCTGAAGCCTTTTTGAAAACGAAGAGGTAAAATCTTCA
AGGACGGTGATTGAGTGCCATGTTGAAGGCCTACTTTGGA
TGTTGGTTGATGATGATCAAAGTGCATATGCTGATATTGT
GCTTTTACAGAACATCACAAACAGCCTTTATAAATATCTG
AAT

OTTDART00000051066 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000051066|OTTDARG00000035838|ZDB-GENE-110408-27 rxfp2b|OTTDARP00000040138 DKEY-1O1.1-001 LG_ CR536612.8 Danio rerio protein_coding KNOWN, 2523 bp
CAATGAGGTCGCTTCAGTCTGCTGCGACCGCGTCTGCACT
GGAGTTATGTTTGATACTTTTCACTACATCAATAACAACA
GCCAAAGCAGGGCAGGAACACAGGCCTTCTGAAGACTGTC
CGCTCGGTCACTTTCCATGTGGCAATGTGAGCATTTGTCT
GCCACAGGTACTGCACTGCAATAACCAGAAAGACTGTCCC
AATGGAGCTGATGAGGACAACTGTGGGGATAACAGTGGCT
GGGCTGACCTCTTCGACCGGACATTTAAACGGGGTTATCT
TCAAGAGCTTGCCACTGACTGCCAAGTGGAGCAGTACCCT
GATGTGTGCCGCTGCATAAACACTGAGATCCACTGCGTGC
ATGCCAGCTTGAGATCCATTCCACAGGTGTCAGCGAATGT
TACCTCCCTGTCATTGAAGAGCAACAAGATTCGAACACTA
CCTGATGAAGCCTTCATCAAATATATAAAACTGCAAAGGC
TGTTTCTCCAAGATAATTGCATCAACACTGTTTCCATTCA
GGCTTTCAGTGGACTGTATAAGCTACAAAAACTATCTTTA
AGCCAGAACTCCATCTCCTTGCTTTCCCCTGGAGTGTTCA
GAGATCTTCGTAAACTTAAGTGGTTGATTTTGGACGACAA
TCCCATAACAACAATTGCAGCCAACACATTTGCTGGCCTA
AGCTCCCTCTTCTTCCTGTCAATGGTGAACACTTCTTTAG
AAGCCCTTCCTTCTGCCAGACTCTGTGCCCATATGCCCTT
TCTCAGCTGGCTGGATTTCGAGGGTAATAGCATCACGACT
TTGGGCTTGTCAACTTTGCTAGACTGTGAACATCTGACTG
TGCTGTCACTGCGAGCCAATCTTATCAAGAGTTTGCCAGA
AAACACCTTCCAATCATTGCGCATGATGGGGGACCTGGAT
CTCTCTAATAATTCGATAAAGGAACTGCCAGTCGGTATTT
TCAAGGATTTACGGTCATTGCAAAGTCTAAATCTGTCCCA
AAACCCACTGGACCACATCCACCCTGGCCAGTTTAATCAT
CTAATTCAGCTCCAGTCTCTTGGCCTGGAGGGAGTGGAGA
TCCCAAATATACAGACAAGCATGTTCCGGCCCATGGATAA
CCTCTCCTACATATACTTCAAGAAGTTCCAGTACTGTTCT
TACGCCCCTCATGTCCGGAAGTGTAAACCCAACTCAGACG
GCCTGTCATCTTTTGAAGATCTGCTTGCTAATGTGGTTCT
TCGTGTGTCCGTGTGGGTCATGGCTTTTATCACCTGCTTT
GGGAACCTCTTTGTCATCGGTATGAGGACAGTCCTGCGGG
CTGAAAACAACCTGCATGCCTTCTGCATCAAGGTTTTGTG
CTGTGAGTACCAGAGGTGCAGATTGCCTAATGGGGGTCTA
TTTGTTTTTTGTGGGGATCTTTGATGTGAAGTTTCGTGGC
GAGTACAATAAGAATGCCAAGGTTTGGATGGAGAGTCTGG
AGTGTCGGACCATCGGGTTTCTGGCCATGCTTTCCTCTGA
GGTTTCCGTCATGCTGCTCACTTACTTGACTCTGGAGAAA
TTCCTGGTCATCGTTTTTCCCTTCAGCCACCTGCGACCGA
GCAAGTGCCAAACATTCACCGTCCTGGTCTCTATATGGCT
GCTGGGCATCTCTATAGCAGCCGTGCCGCTGCTTAATGAG
GATACGTTTGGGAATTACTATGGACTCAATGGAGTGTGTT
TCCCACTTCACTCAGAGCGTCTGGAAAAGCCTGTCGCAAA
AGGATATTCCACTGGGATTTTTCTTGGACTTAACCTGCTG
GCTTTCCTCATCATCGTGGTCTCGTACTCCAGCATGTTTT
ACTCCATCTATAAGACGGGCATCAGAGCCACAGAGCTGCC
GGGTCGACTGCACAGAGACGTGGCCATGGCACACCGCTTC
TTCTTCATCGTGTTTTCTGATGCCCTCTGCTGGATTCCCA
TATTCATGGTCAAAATCCTCTCTCTACTGGAGGTGGAGAT
ACCAGGAACCATCACATCTTGGGTGGTGATCTTCATCCTG
CCCATCAACAGTGCCTTAAACCCCATCCTTTACACACTGA
CCACCAGTTTTTTCAGAGAGCAGGTGGAACATTTATGGGG
ACACTGGCAGAGACAACCAAGACTCAAACAGGGCCGCAAA
AGCCTTACCAGCTCTGTCATCTACATGGACCCCTCGAGAC
CTTCGTTCTACCACCGCAGCTACATCCCACACTCCTCAAT
CTTAGACATTGATGCCAGTTACAGATGAAGATACTGTATG
GTATAATATCATGGCTATTGCATTAATCTGTAGTGGATCT
GCAGAGTTTCCGAAGTGCTGGAAATCCTAAACATAAGGTC
CTGCTGAAGCCTTTTTGAAAACGAAGAGGTAAAATCTTCA
AGGACGGTGATTGAGTGCCATGTTGAAGGCCTACTTTGGA
TGTTGGTTGATGATGATCAAAGTGCATATGCTGATATTGT
GCTTTTACAGAACATCACAAACAGCCTTTATAAATATCTG
AAT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations