Transcript

fdx1-201

ID

ZDB-TSCRIPT-110325-2413

Name

fdx1-201 Nomenclature History

Previous Names

fdx1-005
dkey-46k9.5-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

fdx1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000078904 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000078904.7|gene_biotype:protein_coding|ENSDARG00000056410.8 transcript_biotype:nonsense_mediated_decay gene_symbol:fdx1 cdna chromosome:GRCz11:9:29520785:29527017:1
CACTCATGCAACCTTGGTAGATAGTTATTCGGCGACCCGT
CGACAGTATTTACAGTATTGCAATGTCTGCGTGTGTTTTA
AGAGCGTTTCTCCAGCGAGCGGCTGTTATGCGTCAAGCTG
CACAACAAACAATCAGTCAAACCAGAGCGTTTCCTCAGAG
CTACACACACATTAGAGGAATAAACACATACGCCAATTCA
CTAAGGGCTGAAGAGAAGGTGACTGTTCATTTCCTAAATC
GTGATGGAAAAAGGATTACGGTGAAAGCTTCAATTGGAGA
ATCGCTACTTGATGTTGTTGTCGACCGTGATCTAGATATT
GATGGATTTGGTGCATGCGAGGGAACTTTGGCCTGCTCTA
CGTGCCACCTTATTTTCGAAGAGGACGTTTATAAGAAGCT
TGGACCCGTTTCTGATGAGGAAATGGACATGCTGGACTTG
GCTTATGGGCTTACAGACACGTCTCGTCTGGGCTGTCAGG
TGTGTTTGAGGAAGGATCTGGACGGGATGATACTGCGCGT
GCCAGATGTGATCTCTGATGCTCGAGCTGACAGTGAAAAA
GAGTCCTCCACAGCCCCACCCAAAATATAATCTGAATAAA
GCCCATCTGTATATCATAAACACTGCAATATGGAGATATC
TTTAATAGCAGATTCTGCAACACTCATCTGGTTTTAAATT
GCAGATATGCCTGTAGCTGACTTACTGCAATAAATACTAT
GTTTAACTTT

OTTDART00000049764 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000049764|OTTDARG00000025670|ZDB-GENE-071015-2 fdx1|OTTDARP00000039040 DKEY-46K9.5-005 LG_ BX537139.17 Danio rerio protein_coding KNOWN, 730 bp
CACTCATGCAACCTTGGTAGATAGTTATTCGGCGACCCGT
CGACAGTATTTACAGTATTGCAATGTCTGCGTGTGTTTTA
AGAGCGTTTCTCCAGCGAGCGGCTGTTATGCGTCAAGCTG
CACAACAAACAATCAGTCAAACCAGAGCGTTTCCTCAGAG
CTACACACACATTAGAGGAATAAACACATACGCCAATTCA
CTAAGGGCTGAAGAGAAGGTGACTGTTCATTTCCTAAATC
GTGATGGAAAAAGGATTACGGTGAAAGCTTCAATTGGAGA
ATCGCTACTTGATGTTGTTGTCGACCGTGATCTAGATATT
GATGGATTTGGTGCATGCGAGGGAACTTTGGCCTGCTCTA
CGTGCCACCTTATTTTCGAAGAGGACGTTTATAAGAAGCT
TGGACCCGTTTCTGATGAGGAAATGGACATGCTGGACTTG
GCTTATGGGCTTACAGACACGTCTCGTCTGGGCTGTCAGG
TGTGTTTGAGGAAGGATCTGGACGGGATGATACTGCGCGT
GCCAGATGTGATCTCTGATGCTCGAGCTGACAGTGAAAAA
GAGTCCTCCACAGCCCCACCCAAAATATAATCTGAATAAA
GCCCATCTGTATATCATAAACACTGCAATATGGAGATATC
TTTAATAGCAGATTCTGCAACACTCATCTGGTTTTAAATT
GCAGATATGCCTGTAGCTGACTTACTGCAATAAATACTAT
GTTTAACTTT

Related Transcripts

Transcripts related to fdx1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	fdx1-201	Ensembl	730 nt
aberrant processed transcript	fdx1-203 (1) Ensembl	Ensembl	927 nt	Select Tool
aberrant processed transcript	fdx1-204 (1) Ensembl	Ensembl	870 nt	Select Tool
mRNA	fdx1-202 (1) Ensembl	Ensembl	952 nt	Select Tool
ncRNA	fdx1-003 (1) Ensembl	Ensembl	474 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations