Gene

fdx1

ID
ZDB-GENE-071015-2
Name
ferredoxin 1
Symbol
fdx1 Nomenclature History
Previous Names
  • im:6907289
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have 2 iron, 2 sulfur cluster binding activity and electron transfer activity. Involved in negative regulation of epiboly involved in gastrulation with mouth forming second. Is expressed in brain; digestive system; heart; and pleuroperitoneal region. Orthologous to human FDX1 (ferredoxin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Griffin et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With fdx1 Human Ortholog
No data available
Associated With fdx1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018298 Adrenodoxin, iron-sulphur binding site
Domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
Family IPR001055 Adrenodoxin-like
Homologous_superfamily IPR012675 Beta-grasp domain superfamily
Homologous_superfamily IPR036010 2Fe-2S ferredoxin-like superfamily
Domain Details Per Protein
Protein Length 2Fe-2S ferredoxin-like superfamily 2Fe-2S ferredoxin-type iron-sulfur binding domain Adrenodoxin, iron-sulphur binding site Adrenodoxin-like Beta-grasp domain superfamily
UniProtKB:E7F7J1 175
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript fdx1-201 (1) Ensembl 730 nt
aberrant processed transcript fdx1-203 (1) Ensembl 927 nt
aberrant processed transcript fdx1-204 (1) Ensembl 870 nt
mRNA fdx1-202 (1) Ensembl 952 nt
ncRNA fdx1-003 (1) Ensembl 474 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations