Transcript

sort1a-202

ID
ZDB-TSCRIPT-090929-8294
Name
sort1a-202 Nomenclature History
Previous Names
  • sort1-001
  • sort1a-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000146093 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000146093.3|gene_biotype:protein_coding|ENSDARG00000029402.10 transcript_biotype:protein_coding gene_symbol:sort1a cdna chromosome:GRCz11:11:36281610:36341028:-1
GCAGTGGAACAGCGGCTACTCTACAGACATGCGTCAGAGT
GTAAACACTGCACGGTCTGTTCGATTATCAGCAAACCTGC
TATAAATGGATATTTAAGCAGAAGATTTTTTTGTGCACAT
TAAACGGGAACCATGAGCACCGTGTTGTGCTGTGTTTTGG
TGTTATTAATCTCAGTGGCTCTTTGCATGGACTTTGAAGA
GAGACCCAGCAGCTCCTGGAGGAGTGAGCAAACCATGTTT
CTAAAGAGTCACAAATCACGAAATCTGCTCAGTTTGAGAG
ATTTACAGCAGCCGGACCATGGCAAGATGAAAAGAAGTGA
AGAATCCGCACAAAATCAATGTGAATCATTGCACGGCTAT
CAATCTACATTACAAAACGACACTCACACGCATAACTTCA
ATGACCTGAGTGGTTCAGTGTCTTTGGCCTGGGTTGGAGA
TGGAACAGGGGTCCTGCTGGTTTTGACCACATTCCAGGTC
CCTCTTTTCATCATGCGCTTTGGTCAGTCCAAACTCTACA
GAAGTGAAGACTATGGAAAGACATTTCAGGACATCACGGA
CCTCATTAACAACACCTTCATACAGACAGAGTTCGGCATC
GCAATTGGCCCTGACAATTCCGGCAAGGTGATCCTCACAG
GGGATTTGGCTGAGGAGAAAGTCACCAAAATCTTCCGCTC
GGTTGATTTCGGCAAAAGCTTTGTGACCTCTGAGCTTCCC
TTCCATCCGTTAATGCAGATCACTTACAATCCCAAAGACA
GCAACATACTCATGGTCTACAGCATCAATTATGACTTATG
GCTGTCGAAGGACTTTGGAGCCAACTGGAAGAAGATCCAT
GAGAGTGTTTGTCTAGTAAAATGGGGAATTGATGACACCA
TTTTCCTAACCACAAACCCCAATGGATCCTGCAGTGACCG
GGGGACTCTGGAATTGAGGAAATCATTAGACTATGGCAAA
ACATTCAAAACTATAGGAAACAGGATTTATTCTTTTGGCC
TGGGTGGACGCTTTGTTTTTGCATCCATCATGACAGATTC
GGGTTCCACACGGATGATTCATGTGTCTGTGGATCAGGGG
GAGACGTGGGATATGGCTCAGCTGCCCACCGTTGGCCATG
AACAGTTCTACTCCATTTTAGCTGCAAACAATGATATGGT
CTTCATGCATGTAGATGAACCTGGAGACTCTGGCATTGGT
ACCATATACATATCAGATGATCGAGGTATAGTGTTTTCCA
AGTCTCTGGAGCGTCATTTGTACACCACTACAGGCGGCGA
CACCGACTTCACCAACATCACCTCTCTGAGAGGCGTCTAT
ATAACCAGCGTCCTTGCCGAGGACGGCTCAGTGCGGACGG
TGATCACGTTTAATCAGGGTGGAGAATGGAGGCCTCTGAT
GAAGCCCTGGAATGGAGTGTGTGACTCCACCGCCAAACAT
CCCAGTGAGTGTAGTCTGCATATTCACGCCTCCTACAGCA
TCTCTATGAAACTGAATGTGCCTATGCAGCCTCTCTCCGA
GACCAACGCCGTGGGACTCGTCCTGGCACACGGCAGTGTC
GGAGGAGCCGTCTCTGTGCTTTCTCCAGACGTGTACGTGT
CAGATGACGGAGGCTACACGTGGTTCCAGGCGCTGAAAGG
CCCCCATCACTACGCCATCCTGGATTCAGGAGGACTGCTG
GTGGCGGTGGAGCACAACCCCACACACCCCATATCACAGA
TCAAATTTTCCACTGACGAAGGCCAGTGTTGGCATACGCA
TAACTTCACTGATGATCCAATATACTTCACTGGCCTGGCA
TCAGAACCTGGTGCCCGATCCATGAATGTCAGCTTGTGGG
GCTACAGGGACACCATCCTGAATCAATACTGGGTTTCTGT
CACTGTCGACTTCAGACAGCTGCTCTCTAGAGACTGCCAG
GAGAATGACTACATCCAGTGGCTCGCTCACTCAAGCGATA
TCAACAGCCCCACGGATGGATGCGTGCTGGGATACAAGGA
AAGGTTTTTACGGTTGCGAAGGGATTCGGTCTGCTGGAAT
GGACGGGATTATAAGGTCACCAAGGAGCCCACCACATGTC
CCTGCACTCTGACGGACTTTCATGATTTTGGGTTCTACCA
TGAGGAAAACAGCTCAGTGTGTGTGGAGCAGCCTGACCTT
ATTGGCCATTCACTGGAGTTCTGTCTGCATGGACGCAAAG
AGCAGCTTCAAACCAGCGGTTACCGGAAAATACCCGGTGA
TCACTGTGAGGAAGGAATAACTCCAGAACGGAAAGAGATC
GACCTGAGTAAGAAATGTGTCAGTAATCTGCTGAGGACAG
AGCAACTGACAAAGGAACACTCATTCAATTCAGCTCCTAT
AATCGCCGTGGTCATCATTGTTCTGTTGATCAGTGCTGTT
GCTGGGGTCATTTTCATCAAAAAATACGTCTGTGGAGGAA
GATTCCTGGTGCACAGATACTCCGTATTACAGCAGCATGC
AGAAGCAAATGGTATAGATGGTTTGGATGACCTGGACACA
CTGGAGGGGGGCAAAACGCACTATCATGATGATTCAGATG
AGGACCTTTTGGAGTGACACATGGATCATCATAAGACTGT
ATCAAACGAGAGAAACCACAATGCCTACCCTTCCCATGAT
GTTTGTGTGTGTGTGAATTTACAATTACACACATACCAGA
TTTTGCCACACACTCTTCTGCCCAGCCCAGTTGAGGACAG
TTTTCCAGCAATTCAAGCAGGGTTTGACTACAAGGACAGA
AACAAAAAAACATATTCCCAGAACAGGTTGCTGATCCACT
GCTGAAAGAGTCTTTTTATATTGTTTCACACTATATATTT
GTATTTGAGATGCACAAACTAATGTTGTTGCTGTGTATTT
CACATTTATGAGCTGACACGTAAAATGAAAACATGTGGCT
GAAAAGTGTAGTTTATCCAAAAAAGACATGTCATCGGTTA
CTTATCCTCCACTTGTTCCAAACATCCTCCACTTGTTGTT
GAGTTTCTTTCCTATAGATATTTTTAAGAAGGATAGAAAC
CAGAAGACATTAACACTCATAGTATTTGTTTTTCTTACTA
TGGATGTCAATGGTTACCGGTTTCCAAAATTCTTCAAAAT
ATCTTCTTTTGTATTAAACAAAAAAATGAGTCTCATAAAG
ATTCTCTCATTTAGATATTTTCAAGAAAGATAAAAGCCAG
AACACATTGACTCCCATAGTATTTTTTTACTATTATAGAT
GTCAATAGTTACCGGTTTCCAACATTCTCCAAATATATTT
GAAAAAAAAAAAAAAAAAAACGAATCCCATAAAGATTGTT
TCATGTAGATATTTTCAAAAAGGATGCAAACTGGAAGACA
CTGACTCCCATGGTATTTGCTTTTCCTACTATGGAAGTCA
ATGGTTACTGGTTTCCAAAATTCTTCAAAATATCTTCTTT
TGTATTCAATAGAAAAAACAAATCCCATAAAAAATTCTTT
CATATAGATAATTTTAAGAGGGATCGAAACTGGAAGACAC
TAACTGCCTTATTATTTGTTTTTCCAACTATGGAAGTCAA
TGGTTACCCGTTTCCAACATTCTTCACAATATCTTATTTT
GTGTTCAACAATAAAATTAATCCCATAAAGATTCTTTCAT
TTAGATATTTTCAACAAGGATGTAAACTGGAAGACACTGA
CTCTCATAGTATTTGTTTTTCCTACTATGGATGTCAGTGG
TTACCGGTTTCCATCATTTTTCAAAATATCTTCTTTTGTG
TTTAACAGAAAAAAAAACGAATCCTATAAAAATCTGAAAC
CACTTGAGGATGAGTAAATGATGGATAAATGTTCATTTTT
GGTTGACCTATCCCCTTAACTACAGTAAGTTGTGTTTTGC
AAGCCATCCTAATTGAAGTATGATTTAAAAGAGGAAAAGA
GAGAGTGGTTCAAATTGATTCAAGTGCTTTTTTCTTTCAT
GCATCAGGTATTTATACTTCACCAAAGGATTTTCTTTTCT
TTATTTTGCATATTAGGAAACCGGGTTGAAGTCTGCTTAG
TAGCACACTATGCACTTGGCATATCTTGTATGCACAAATA
ATTCTTCTATTTCAGTATTACCGAAGCTGATTTTTGTTTG
GTACATAGTCTCGTGATGCAAGAAAGGATTGGAGAAATGG
CACATTGCGTGGTTTTCAATCATAATAATAGTATTTCGCA
CCTTATAATGGAGAATAAGTGAGTGAATTAAACATAACAG
CAGTGCAGGGCCAGTCTCAATAGTTGTATATTCAATACGG
ACAAAATGTTTAATGTTAACTCTGACATTAAATGTGTTTT
TTCAGAAAAGGAGTTCATCCTTCATTGGGATGTCGATAGT
ATTACACACCTCTAAATATCAGCCTAATCAAATATGAAAG
TGTATATTTTTAGACTGTATTGGTTGGCGATTCATAAATA
AGCTAATGTGTAGTCAGTAATCTGATTCGAGTGCATTTTC
TTCCTTTTTTTTTTTTTGTTGCACAGATAATAAATAGATA
CCTCAGGGGTTATAGTTGACAGTGGACCACACATTTCATT
GATGGGTTTGCATGTTGAATAAAGGGTCCTCGAGTTTCAG
ATGGACTTTCTGAAGTCAAAGTGTAAAATGCTGTACCATT
AAATGTGACTGCCAAGAATAATAATTAAAAAAAACAATCT
TCTTGAA

OTTDART00000025564 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000025564|OTTDARG00000020443|ZDB-GENE-040426-2329 sort1a|OTTDARP00000021020 sort1-001 LG_ BX248230.21 Danio rerio protein_coding KNOWN, 4687 bp
GCAGTGGAACAGCGGCTACTCTACAGACATGCGTCAGAGT
GTAAACACTGCACGGTCTGTTCGATTATCAGCAAACCTGC
TATAAATGGATATTTAAGCAGAAGATTTTTTTGTGCACAT
TAAACGGGAACCATGAGCACCGTGTTGTGCTGTGTTTTGG
TGTTATTAATCTCAGTGGCTCTTTGCATGGACTTTGAAGA
GAGACCCAGCAGCTCCTGGAGGAGTGAGCAAACCATGTTT
CTAAAGAGTCACAAATCACGAAATCTGCTCAGTTTGAGAG
ATTTACAGCAGCCGGACCATGGCAAGATGAAAAGAAGTGA
AGAATCCGCACAAAATCAATGTGAATCATTGCACGGCTAT
CAATCTACATTACAAAACGACACTCACACGCATAACTTCA
ATGACCTGAGTGGTTCAGTGTCTTTGGCCTGGGTTGGAGA
TGGAACAGGGGTCCTGCTGGTTTTGACCACATTCCAGGTC
CCTCTTTTCATCATGCGCTTTGGTCAGTCCAAACTCTACA
GAAGTGAAGACTATGGAAAGACATTTCAGGACATCACGGA
CCTCATTAACAACACCTTCATACAGACAGAGTTCGGCATC
GCAATTGGCCCTGACAATTCCGGCAAGGTGATCCTCACAG
GGGATTTGGCTGAGGAGAAAGTCACCAAAATCTTCCGCTC
GGTTGATTTCGGCAAAAGCTTTGTGACCTCTGAGCTTCCC
TTCCATCCGTTAATGCAGATCACTTACAATCCCAAAGACA
GCAACATACTCATGGTCTACAGCATCAATTATGACTTATG
GCTGTCGAAGGACTTTGGAGCCAACTGGAAGAAGATCCAT
GAGAGTGTTTGTCTAGTAAAATGGGGAATTGATGACACCA
TTTTCCTAACCACAAACCCCAATGGATCCTGCAGTGACCG
GGGGACTCTGGAATTGAGGAAATCATTAGACTATGGCAAA
ACATTCAAAACTATAGGAAACAGGATTTATTCTTTTGGCC
TGGGTGGACGCTTTGTTTTTGCATCCATCATGACAGATTC
GGGTTCCACACGGATGATTCATGTGTCTGTGGATCAGGGG
GAGACGTGGGATATGGCTCAGCTGCCCACCGTTGGCCATG
AACAGTTCTACTCCATTTTAGCTGCAAACAATGATATGGT
CTTCATGCATGTAGATGAACCTGGAGACTCTGGCATTGGT
ACCATATACATATCAGATGATCGAGGTATAGTGTTTTCCA
AGTCTCTGGAGCGTCATTTGTACACCACTACAGGCGGCGA
CACCGACTTCACCAACATCACCTCTCTGAGAGGCGTCTAT
ATAACCAGCGTCCTTGCCGAGGACGGCTCAGTGCGGACGG
TGATCACGTTTAATCAGGGTGGAGAATGGAGGCCTCTGAT
GAAGCCCTGGAATGGAGTGTGTGACTCCACCGCCAAACAT
CCCAGTGAGTGTAGTCTGCATATTCACGCCTCCTACAGCA
TCTCTATGAAACTGAATGTGCCTATGCAGCCTCTCTCCGA
GACCAACGCCGTGGGACTCGTCCTGGCACACGGCAGTGTC
GGAGGAGCCGTCTCTGTGCTTTCTCCAGACGTGTACGTGT
CAGATGACGGAGGCTACACGTGGTTCCAGGCGCTGAAAGG
CCCCCATCACTACGCCATCCTGGATTCAGGAGGACTGCTG
GTGGCGGTGGAGCACAACCCCACACACCCCATATCACAGA
TCAAATTTTCCACTGACGAAGGCCAGTGTTGGCATACGCA
TAACTTCACTGATGATCCAATATACTTCACTGGCCTGGCA
TCAGAACCTGGTGCCCGATCCATGAATGTCAGCTTGTGGG
GCTACAGGGACACCATCCTGAATCAATACTGGGTTTCTGT
CACTGTCGACTTCAGACAGCTGCTCTCTAGAGACTGCCAG
GAGAATGACTACATCCAGTGGCTCGCTCACTCAAGCGATA
TCAACAGCCCCACGGATGGATGCGTGCTGGGATACAAGGA
AAGGTTTTTACGGTTGCGAAGGGATTCGGTCTGCTGGAAT
GGACGGGATTATAAGGTCACCAAGGAGCCCACCACATGTC
CCTGCACTCTGACGGACTTTCATGATTTTGGGTTCTACCA
TGAGGAAAACAGCTCAGTGTGTGTGGAGCAGCCTGACCTT
ATTGGCCATTCACTGGAGTTCTGTCTGCATGGACGCAAAG
AGCAGCTTCAAACCAGCGGTTACCGGAAAATACCCGGTGA
TCACTGTGAGGAAGGAATAACTCCAGAACGGAAAGAGATC
GACCTGAGTAAGAAATGTGTCAGTAATCTGCTGAGGACAG
AGCAACTGACAAAGGAACACTCATTCAATTCAGCTCCTAT
AATCGCCGTGGTCATCATTGTTCTGTTGATCAGTGCTGTT
GCTGGGGTCATTTTCATCAAAAAATACGTCTGTGGAGGAA
GATTCCTGGTGCACAGATACTCCGTATTACAGCAGCATGC
AGAAGCAAATGGTATAGATGGTTTGGATGACCTGGACACA
CTGGAGGGGGGCAAAACGCACTATCATGATGATTCAGATG
AGGACCTTTTGGAGTGACACATGGATCATCATAAGACTGT
ATCAAACGAGAGAAACCACAATGCCTACCCTTCCCATGAT
GTTTGTGTGTGTGTGAATTTACAATTACACACATACCAGA
TTTTGCCACACACTCTTCTGCCCAGCCCAGTTGAGGACAG
TTTTCCAGCAATTCAAGCAGGGTTTGACTACAAGGACAGA
AACAAAAAAACATATTCCCAGAACAGGTTGCTGATCCACT
GCTGAAAGAGTCTTTTTATATTGTTTCACACTATATATTT
GTATTTGAGATGCACAAACTAATGTTGTTGCTGTGTATTT
CACATTTATGAGCTGACACGTAAAATGAAAACATGTGGCT
GAAAAGTGTAGTTTATCCAAAAAAGACATGTCATCGGTTA
CTTATCCTCCACTTGTTCCAAACATCCTCCACTTGTTGTT
GAGTTTCTTTCCTATAGATATTTTTAAGAAGGATAGAAAC
CAGAAGACATTAACACTCATAGTATTTGTTTTTCTTACTA
TGGATGTCAATGGTTACCGGTTTCCAAAATTCTTCAAAAT
ATCTTCTTTTGTATTAAACAAAAAAATGAGTCTCATAAAG
ATTCTCTCATTTAGATATTTTCAAGAAAGATAAAAGCCAG
AACACATTGACTCCCATAGTATTTTTTTACTATTATAGAT
GTCAATAGTTACCGGTTTCCAACATTCTCCAAATATATTT
GAAAAAAAAAAAAAAAAAAACGAATCCCATAAAGATTGTT
TCATGTAGATATTTTCAAAAAGGATGCAAACTGGAAGACA
CTGACTCCCATGGTATTTGCTTTTCCTACTATGGAAGTCA
ATGGTTACTGGTTTCCAAAATTCTTCAAAATATCTTCTTT
TGTATTCAATAGAAAAAACAAATCCCATAAAAAATTCTTT
CATATAGATAATTTTAAGAGGGATCGAAACTGGAAGACAC
TAACTGCCTTATTATTTGTTTTTCCAACTATGGAAGTCAA
TGGTTACCCGTTTCCAACATTCTTCACAATATCTTATTTT
GTGTTCAACAATAAAATTAATCCCATAAAGATTCTTTCAT
TTAGATATTTTCAACAAGGATGTAAACTGGAAGACACTGA
CTCTCATAGTATTTGTTTTTCCTACTATGGATGTCAGTGG
TTACCGGTTTCCATCATTTTTCAAAATATCTTCTTTTGTG
TTTAACAGAAAAAAAAACGAATCCTATAAAAATCTGAAAC
CACTTGAGGATGAGTAAATGATGGATAAATGTTCATTTTT
GGTTGACCTATCCCCTTAACTACAGTAAGTTGTGTTTTGC
AAGCCATCCTAATTGAAGTATGATTTAAAAGAGGAAAAGA
GAGAGTGGTTCAAATTGATTCAAGTGCTTTTTTCTTTCAT
GCATCAGGTATTTATACTTCACCAAAGGATTTTCTTTTCT
TTATTTTGCATATTAGGAAACCGGGTTGAAGTCTGCTTAG
TAGCACACTATGCACTTGGCATATCTTGTATGCACAAATA
ATTCTTCTATTTCAGTATTACCGAAGCTGATTTTTGTTTG
GTACATAGTCTCGTGATGCAAGAAAGGATTGGAGAAATGG
CACATTGCGTGGTTTTCAATCATAATAATAGTATTTCGCA
CCTTATAATGGAGAATAAGTGAGTGAATTAAACATAACAG
CAGTGCAGGGCCAGTCTCAATAGTTGTATATTCAATACGG
ACAAAATGTTTAATGTTAACTCTGACATTAAATGTGTTTT
TTCAGAAAAGGAGTTCATCCTTCATTGGGATGTCGATAGT
ATTACACACCTCTAAATATCAGCCTAATCAAATATGAAAG
TGTATATTTTTAGACTGTATTGGTTGGCGATTCATAAATA
AGCTAATGTGTAGTCAGTAATCTGATTCGAGTGCATTTTC
TTCCTTTTTTTTTTTTTGTTGCACAGATAATAAATAGATA
CCTCAGGGGTTATAGTTGACAGTGGACCACACATTTCATT
GATGGGTTTGCATGTTGAATAAAGGGTCCTCGAGTTTCAG
ATGGACTTTCTGAAGTCAAAGTGTAAAATGCTGTACCATT
AAATGTGACTGCCAAGAATAATAATTAAAAAAAACAATCT
TCTTGAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations