Transcript

sh3rf1-201

ID
ZDB-TSCRIPT-090929-560
Name
sh3rf1-201 Nomenclature History
Previous Names
  • sh3rf1-001
  • si:dkey-15j16.4-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000050559 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000050559.7|gene_biotype:protein_coding|ENSDARG00000070470.7 transcript_biotype:protein_coding gene_symbol:sh3rf1 cdna chromosome:GRCz11:20:23742574:23836967:1
CGCTGCGGTGTCCCACAGAATCAACGCGGCTCGTCATGGC
GCTCGGACGCAAGAACTCGCTTCTCCTGTTTTTCTCTGCT
TTCTTCTGAATTGACTCCATCTGACTCTCTTGGACTGGGA
TCTTTTGCCCTTTCGACTGAACGGCTCAAGAGCGACGATC
TAATCTTCGCTGTGATAAAAGGATCTGAATATGTAAACTT
GAGTAGAACTGGGCGAGCAAGATTTCAGGATCCCTTTTCC
AGGGCGAATTCCCTAGTTTGAGGAACTCGGGAAAGAAACT
GTTCTGGAAGAAGAGGAGGAGTGAGAAGGGGCCCTTTTTT
AAGTGAATGCTAGAGACTTGATCATGACTACGGCATGGGA
GTGACGTGACGTCAGGATTGGACTTTCCCTCCTAACAATC
TCATATGCACACACCCACACCATGTGCTTCTCTCTCCGGC
GAGACAAAACTGACTGAATGAACGAGTACGCTGAGAAAGA
TTGTGCGAGTGTGAAAATGGACGAGTCTGCGCTCCTGGAC
CTGTTGGAGTGTCCGGTCTGCTTGGAGCGTCTAGATGCCA
CGGCGAAGGTGTTGCCATGCCAGCATACGTTTTGCAGACG
CTGCCTGCTTGGAATTGTGGGATCTCGTGGAGAACTGCGC
TGCCCCGAGTGCCGCACGCTAGTGGAGAGCGGCGTGGATG
AGTTGCCTAGCAATATCCTCCTTGTACGGCTACTAGATGG
CATCAAGCAGAGGCCGAGGAGGACTGGAAGTGTGCATGGC
ACATGTGCTAATGGATCGGCAGTGGCGGGGGTCCGAGCGC
AGGGTGCCGGGGGAAGCCAAAGGGATCCTGGTCCCACAGG
GGGACAATCTCAGCGTGTCCAAGCAAAGAGCACTCCAGTT
AGGGGAGTTCCTCAGTTACCCTGCGCTAAGGCTCTATACA
ACTACGATGGCAAAGAACCTGGAGATCTCAAGTTCAGCAA
AGGTGACATCATCATACTGCGACGACAGGTTGATGAAAAC
TGGTACCACGGAGAGATGGGAGGAGTCCATGGCTTTTTCC
CAACCAATTTTGTCCAGGTCATCAAACCTCTCCCACAGCC
GCCCCCTCAATGCAAAGCCCTGTACGACTTTGAGCTCAAA
GATAAGGAGGCTGACAAGGACTGCCTGCCTTTTTCAAAGG
ATGATATTCTTACTGTGATTCGTCGTGTGGATGAGAACTG
GGCGGAAGGCATGCTGGGAGATAAGATTGGCATCTTCCCC
ATATCTTATGTAGAGTTTAACAGTGCGGCTCGACAGCTCA
TAGAACTGGACAAACCATCTGAAGGAGGAGGAGACTCTAG
TGAAGGACCGTCCTCGTCCTCCTCGGGCCCTCAAGCCAAT
GGCTCCCAGAAAGCCCCTGGGGAAAAGAAGAACAGTAAGA
AGCGGCACTCCTTCACCTCATTGACTATGTCCCATAAGCC
TTGCCTGGCTCCTCCACCACAGAGACACTCCATGGAGATC
AGCGGCCCGGTTCTGATCAGCTCCTCTAACCCCACAGCAG
CGGCCCGGATCGGAGAGCTCAGCGGAGGCCTTTCCTCCAG
CGCACCTTCACAGGTTCACATTTGCACAACAGGACTCATT
GTGACTCCTCCACCAAGCAGTCCTGTCACCACAGCGACAG
TTTTCACATTTCCTCCAGAAACCAGCTATGCCTCTATTCC
AGTGGATGCTCTTCCTCCTCCACCTCCTCCTCCACCTCAG
TCTCAGTCCTCAGTTGTTGGCGCTGCCGCCTTGAATGCTG
GCCAAAGGCCATCACCCGCTGCGGGCGACCAGAGTGGCCG
TCAGAGACCCACAGTGTATGTGGCGATGTTTCCGTACTCT
CCCCGTAAGGAGGATGAGTTGGAGCTGAGGAAGGGTGAGA
TGTTTCTGGTGCTGGAGCGCTGTCAGGACGGCTGGTTTAA
AGGAACATCCATGCACACTGGCAAGATCGGAGTGTTTCCT
GGTAACTACATGAGTCCTGTCAGCAGGACTGTTTCTGGCA
GCAGTCAGCCTAAAGTCCCCCTGACCCTTTGCTCTCAGGC
TGGACGTGGCGTCACCATTGTCAGCCCTTCATCTGCTTTG
GGGAGTATGGACCTCAGCAAACCTCTGCCAGTCTGCCCAA
ACGCTACCCCATCCTGCTCACTGCCTGCTGCTGTGGTGAC
AGCTGCACATCTACCCACCGGTCAGCACCCCAAAGTGCTC
ATGCATGTGACGTCACAGATGACTGTTAACCAGGCACGCA
ATGCAGTCAGAACAGCTGTAAGTCACAGTCAGGACCGGCC
TACAGCAGCAGTGACACCCATTCAATCCCACAATCCTGTA
GCTTACCTTCCCAGCACAGCTGTGGTTCTCCAGGCGTCAC
CTGTCCTGAACTCCAGTTCGGGATGCTCCTCCGCTAGGGT
CGGGGTGGCTTTGGGTTGCGCTGCCGCATCCTTGACCCCT
CCTAATGTTAGCGCTGCTTCTTTAGACACTGATGCCATGA
GACCTGTTCCTATGGTGGCATTACCTGTGAACGCTGGCAG
CACTAAACCTCTCGGGGCAGCATCCAATCACGGTGTGGCC
TGTAGGCTGGATAAAGATTGCAAGAGAGAGAAGAAAGGCC
TGCTGAAACTGCTGTCCAATAAAAAGAAGCTCCGCCCATC
TCCTCCATCCTCCCCCACACTGGAGGCAGAGCAATCTGTT
AGCATGGAGCTTCCCCAAGGAGCAGTGGGTCCAGAAATGG
CTCTGTCTGGGTCAGCAGGGCACAACGGACGCATTGGTGC
CTGTCCTATGGATTCGGAGCTATCGATGTCCTCCTCTTCA
TCAAACACAGATGCGGTGACACACAGGAGCAGCCCACAGG
ACAACACTGCCCCCATTGCTCCGCCTCCTCGACAGCCGTG
CTCCTCCCTGCTCTCCATGCAGCATGATGGACGGCCAATC
GTGTGTGAGAGGTATCGTGTGGTGGTGTCCTATCCTCCCC
AAAGTGAAGCAGAGCTGGAACTCAAAGAGGGAGACATTGT
ATTTGTGCACAAAAAACGAGAGGACGGCTGGTTTAAAGGA
ACACTACAGAGAAACGGCAGAACCGGGCTGTTTCCTGGCA
GCTTTGTTGACAGTATCTAACGTACACACAGCAACTAATA
TTTAGATATCAAATTCTCCATCACTGAAAACCCCACACTG
AACTTAAGCCTTCATTCGCTGAGCAGTGGTCTGAAACTCA
ACTGCTGGAGTTTTGCTTCATCAGCTGCATGGATTTAACC
ACAGTCTTATGAAAATCTCAGACCAGTCCTAGTCCTTTAG
CATTAGATCAAAACCCCCTTTCCCCAAACACTTCAAAGCG
GCAGAGTTTTCGTAGTAGGTGCCCTATTTCTAGCTCAGTA
GATGAAGTTGTGATAGGATCCGTTAATTTATGCATCTGTA
ACATTTCAAAGACATTTAATGTGTGCCTTGTACTGTCTCA
CTTTACTGTATATAAGCAAAGCAAAGCTGATCTGAGTCAT
GACGAGAACAATATGAATTTCTTTCCACCTGAAAAACATT
TAACTTATTTTTGCTTTGTAGTTTTTGAGGGAAGGTTTGT
TATGTGAGCCGACTGGTCGAATGCCTGTAGAGTCTGAGTT
ATGTCACTGATGGACATTTGCTTGAAATAAATCAACAATC
AATACCAGATGAACAGCAGAATGAATTCAGAAAGGTTGCT
TCACTTTAGCTTTCATATTGAAGTCATTTGATGAGGAGTG
AAGACACCACAGGCCTCCCATTCTGATTGGTTGTTGTGTG
TTTGTAAAGGCTATTATAGCTACGCTGACTGATGGAATGA
AGGATGACTGATTGTTAGTTTTTAAAGATTACACTCAGAC
TTTGAATCCAATATTACTAATTGTCATTACGATCGGGAAC
AGTCACCCTTAGTAAAAGTGCAGGATCCTACAATGATGAT
GCCAATGTGCGCATGTGTTTGTTCCCTCTCTGGTATTTAT
AACTGCTTTCGTTTCAGAATGATACATTGGTCTATGCGTG
AGCTCCCAAAATATTTTTGATTGATGATTAAAAAATAGCC
TTTATGTAACATTACAACCTGGCTGATTTCATATGATTGA
CTAAAAATGGTCTTTAAAAGTGTTGTTTAACTCCAAATCC
ACAAAACGTTGCTTCTCTTAAAGTCGGGTCTGTTGTCTGC
TGTATTTTATGTGACATTTCATGTTTTGTATACTTGAAAG
TGATGGTGTTTGTGTATTTCTATGCTTCATACAGTAGATC
AAATGTTTTTATTAATATTATTATTATGTTGAAAGCACAA
AATCTTTTTTTTTTAAATAGAGTATTGTTAGATATAATTA
TTGCCCCATTAAAACGCTGGTTCATTTGGGAGATCTTTAA
TTGTTGTCTTGATGATGCCTTTACAACTAGTAAGATGGCC
TTCGGTTTGTGTATTACTATTGTATTAGTTTATCCAACCA
CTGAGTTGAACAATTGTTCTCTGTTTTAGATTACTGGTTT
TGGCTCTATTCATGGAGCTCCCGACATGAGCCGACTCTAG
ATTAAACTTTCCACATGAGGAGCATTTCACTGCTTGAATC
AAGCATGTTTAAAGTTGACACTTGTTCACTTGTCAAGATC
TTAAAGTCAGTAAATGGGATATTAGTCAGAAGAAAATTGA
ACATTTGATTTCAGCTCATTCAAGTGTGTGTTAGATGTGA
GGGGTATAAAATAAAGTCATTTTTATAAAACCTG

OTTDART00000005863 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000005863|OTTDARG00000005408|ZDB-GENE-030131-6288 sh3rf1|OTTDARP00000005247 DKEY-15J16.4-001 LG_ BX255904.6 Danio rerio protein_coding KNOWN, 4714 bp
CGCTGCGGTGTCCCACAGAATCAACGCGGCTCGTCATGGC
GCTCGGACGCAAGAACTCGCTTCTCCTGTTTTTCTCTGCT
TTCTTCTGAATTGACTCCATCTGACTCTCTTGGACTGGGA
TCTTTTGCCCTTTCGACTGAACGGCTCAAGAGCGACGATC
TAATCTTCGCTGTGATAAAAGGATCTGAATATGTAAACTT
GAGTAGAACTGGGCGAGCAAGATTTCAGGATCCCTTTTCC
AGGGCGAATTCCCTAGTTTGAGGAACTCGGGAAAGAAACT
GTTCTGGAAGAAGAGGAGGAGTGAGAAGGGGCCCTTTTTT
AAGTGAATGCTAGAGACTTGATCATGACTACGGCATGGGA
GTGACGTGACGTCAGGATTGGACTTTCCCTCCTAACAATC
TCATATGCACACACCCACACCATGTGCTTCTCTCTCCGGC
GAGACAAAACTGACTGAATGAACGAGTACGCTGAGAAAGA
TTGTGCGAGTGTGAAAATGGACGAGTCTGCGCTCCTGGAC
CTGTTGGAGTGTCCGGTCTGCTTGGAGCGTCTAGATGCCA
CGGCGAAGGTGTTGCCATGCCAGCATACGTTTTGCAGACG
CTGCCTGCTTGGAATTGTGGGATCTCGTGGAGAACTGCGC
TGCCCCGAGTGCCGCACGCTAGTGGAGAGCGGCGTGGATG
AGTTGCCTAGCAATATCCTCCTTGTACGGCTACTAGATGG
CATCAAGCAGAGGCCGAGGAGGACTGGAAGTGTGCATGGC
ACATGTGCTAATGGATCGGCAGTGGCGGGGGTCCGAGCGC
AGGGTGCCGGGGGAAGCCAAAGGGATCCTGGTCCCACAGG
GGGACAATCTCAGCGTGTCCAAGCAAAGAGCACTCCAGTT
AGGGGAGTTCCTCAGTTACCCTGCGCTAAGGCTCTATACA
ACTACGATGGCAAAGAACCTGGAGATCTCAAGTTCAGCAA
AGGTGACATCATCATACTGCGACGACAGGTTGATGAAAAC
TGGTACCACGGAGAGATGGGAGGAGTCCATGGCTTTTTCC
CAACCAATTTTGTCCAGGTCATCAAACCTCTCCCACAGCC
GCCCCCTCAATGCAAAGCCCTGTACGACTTTGAGCTCAAA
GATAAGGAGGCTGACAAGGACTGCCTGCCTTTTTCAAAGG
ATGATATTCTTACTGTGATTCGTCGTGTGGATGAGAACTG
GGCGGAAGGCATGCTGGGAGATAAGATTGGCATCTTCCCC
ATATCTTATGTAGAGTTTAACAGTGCGGCTCGACAGCTCA
TAGAACTGGACAAACCATCTGAAGGAGGAGGAGACTCTAG
TGAAGGACCGTCCTCGTCCTCCTCGGGCCCTCAAGCCAAT
GGCTCCCAGAAAGCCCCTGGGGAAAAGAAGAACAGTAAGA
AGCGGCACTCCTTCACCTCATTGACTATGTCCCATAAGCC
TTGCCTGGCTCCTCCACCACAGAGACACTCCATGGAGATC
AGCGGCCCGGTTCTGATCAGCTCCTCTAACCCCACAGCAG
CGGCCCGGATCGGAGAGCTCAGCGGAGGCCTTTCCTCCAG
CGCACCTTCACAGGTTCACATTTGCACAACAGGACTCATT
GTGACTCCTCCACCAAGCAGTCCTGTCACCACAGCGACAG
TTTTCACATTTCCTCCAGAAACCAGCTATGCCTCTATTCC
AGTGGATGCTCTTCCTCCTCCACCTCCTCCTCCACCTCAG
TCTCAGTCCTCAGTTGTTGGCGCTGCCGCCTTGAATGCTG
GCCAAAGGCCATCACCCGCTGCGGGCGACCAGAGTGGCCG
TCAGAGACCCACAGTGTATGTGGCGATGTTTCCGTACTCT
CCCCGTAAGGAGGATGAGTTGGAGCTGAGGAAGGGTGAGA
TGTTTCTGGTGCTGGAGCGCTGTCAGGACGGCTGGTTTAA
AGGAACATCCATGCACACTGGCAAGATCGGAGTGTTTCCT
GGTAACTACATGAGTCCTGTCAGCAGGACTGTTTCTGGCA
GCAGTCAGCCTAAAGTCCCCCTGACCCTTTGCTCTCAGGC
TGGACGTGGCGTCACCATTGTCAGCCCTTCATCTGCTTTG
GGGAGTATGGACCTCAGCAAACCTCTGCCAGTCTGCCCAA
ACGCTACCCCATCCTGCTCACTGCCTGCTGCTGTGGTGAC
AGCTGCACATCTACCCACCGGTCAGCACCCCAAAGTGCTC
ATGCATGTGACGTCACAGATGACTGTTAACCAGGCACGCA
ATGCAGTCAGAACAGCTGTAAGTCACAGTCAGGACCGGCC
TACAGCAGCAGTGACACCCATTCAATCCCACAATCCTGTA
GCTTACCTTCCCAGCACAGCTGTGGTTCTCCAGGCGTCAC
CTGTCCTGAACTCCAGTTCGGGATGCTCCTCCGCTAGGGT
CGGGGTGGCTTTGGGTTGCGCTGCCGCATCCTTGACCCCT
CCTAATGTTAGCGCTGCTTCTTTAGACACTGATGCCATGA
GACCTGTTCCTATGGTGGCATTACCTGTGAACGCTGGCAG
CACTAAACCTCTCGGGGCAGCATCCAATCACGGTGTGGCC
TGTAGGCTGGATAAAGATTGCAAGAGAGAGAAGAAAGGCC
TGCTGAAACTGCTGTCCAATAAAAAGAAGCTCCGCCCATC
TCCTCCATCCTCCCCCACACTGGAGGCAGAGCAATCTGTT
AGCATGGAGCTTCCCCAAGGAGCAGTGGGTCCAGAAATGG
CTCTGTCTGGGTCAGCAGGGCACAACGGACGCATTGGTGC
CTGTCCTATGGATTCGGAGCTATCGATGTCCTCCTCTTCA
TCAAACACAGATGCGGTGACACACAGGAGCAGCCCACAGG
ACAACACTGCCCCCATTGCTCCGCCTCCTCGACAGCCGTG
CTCCTCCCTGCTCTCCATGCAGCATGATGGACGGCCAATC
GTGTGTGAGAGGTATCGTGTGGTGGTGTCCTATCCTCCCC
AAAGTGAAGCAGAGCTGGAACTCAAAGAGGGAGACATTGT
ATTTGTGCACAAAAAACGAGAGGACGGCTGGTTTAAAGGA
ACACTACAGAGAAACGGCAGAACCGGGCTGTTTCCTGGCA
GCTTTGTTGACAGTATCTAACGTACACACAGCAACTAATA
TTTAGATATCAAATTCTCCATCACTGAAAACCCCACACTG
AACTTAAGCCTTCATTCGCTGAGCAGTGGTCTGAAACTCA
ACTGCTGGAGTTTTGCTTCATCAGCTGCATGGATTTAACC
ACAGTCTTATGAAAATCTCAGACCAGTCCTAGTCCTTTAG
CATTAGATCAAAACCCCCTTTCCCCAAACACTTCAAAGCG
GCAGAGTTTTCGTAGTAGGTGCCCTATTTCTAGCTCAGTA
GATGAAGTTGTGATAGGATCCGTTAATTTATGCATCTGTA
ACATTTCAAAGACATTTAATGTGTGCCTTGTACTGTCTCA
CTTTACTGTATATAAGCAAAGCAAAGCTGATCTGAGTCAT
GACGAGAACAATATGAATTTCTTTCCACCTGAAAAACATT
TAACTTATTTTTGCTTTGTAGTTTTTGAGGGAAGGTTTGT
TATGTGAGCCGACTGGTCGAATGCCTGTAGAGTCTGAGTT
ATGTCACTGATGGACATTTGCTTGAAATAAATCAACAATC
AATACCAGATGAACAGCAGAATGAATTCAGAAAGGTTGCT
TCACTTTAGCTTTCATATTGAAGTCATTTGATGAGGAGTG
AAGACACCACAGGCCTCCCATTCTGATTGGTTGTTGTGTG
TTTGTAAAGGCTATTATAGCTACGCTGACTGATGGAATGA
AGGATGACTGATTGTTAGTTTTTAAAGATTACACTCAGAC
TTTGAATCCAATATTACTAATTGTCATTACGATCGGGAAC
AGTCACCCTTAGTAAAAGTGCAGGATCCTACAATGATGAT
GCCAATGTGCGCATGTGTTTGTTCCCTCTCTGGTATTTAT
AACTGCTTTCGTTTCAGAATGATACATTGGTCTATGCGTG
AGCTCCCAAAATATTTTTGATTGATGATTAAAAAATAGCC
TTTATGTAACATTACAACCTGGCTGATTTCATATGATTGA
CTAAAAATGGTCTTTAAAAGTGTTGTTTAACTCCAAATCC
ACAAAACGTTGCTTCTCTTAAAGTCGGGTCTGTTGTCTGC
TGTATTTTATGTGACATTTCATGTTTTGTATACTTGAAAG
TGATGGTGTTTGTGTATTTCTATGCTTCATACAGTAGATC
AAATGTTTTTATTAATATTATTATTATGTTGAAAGCACAA
AATCTTTTTTTTTTAAATAGAGTATTGTTAGATATAATTA
TTGCCCCATTAAAACGCTGGTTCATTTGGGAGATCTTTAA
TTGTTGTCTTGATGATGCCTTTACAACTAGTAAGATGGCC
TTCGGTTTGTGTATTACTATTGTATTAGTTTATCCAACCA
CTGAGTTGAACAATTGTTCTCTGTTTTAGATTACTGGTTT
TGGCTCTATTCATGGAGCTCCCGACATGAGCCGACTCTAG
ATTAAACTTTCCACATGAGGAGCATTTCACTGCTTGAATC
AAGCATGTTTAAAGTTGACACTTGTTCACTTGTCAAGATC
TTAAAGTCAGTAAATGGGATATTAGTCAGAAGAAAATTGA
ACATTTGATTTCAGCTCATTCAAGTGTGTGTTAGATGTGA
GGGGTATAAAATAAAGTCATTTTTATAAAACCTG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations