Transcript

vipas39-201

ID
ZDB-TSCRIPT-090929-452
Name
vipas39-201 Nomenclature History
Previous Names
  • vipar-002
  • vipas39-002
  • si:ch211-20b12.1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000159636 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000159636.2|gene_biotype:protein_coding|ENSDARG00000103690.2 transcript_biotype:nonsense_mediated_decay gene_symbol:vipas39 cdna chromosome:GRCz11:20:18354409:18382352:-1
AGATGACACGAGCCAAACCTGAGGATGATGAGTACTGGAA
CAGCTCCAAATTCAAAGCCTTCACCTTCGATGATGAAGAC
GATGAGTTTTCACGGCTGAAAGAGTCCAAACGGGCAGTGA
ACAGCATCCTGGTGGATGATGATGATGATGAAGACGATGT
TGAGAAAGTGAGCTGGAGCGGGGAACCTGTGGGAAGCATC
TCTTGGTCAGTGAGGGAAACTGCCTCCAGTATCCGCTCTG
GGAGTGAGCAGAACTTTCCCAAAATCGATACCGCCCCTTC
ACTGTCCAAACAGGGCTCTGGATACTCCCTGAGCTCGCTG
TTTAAAGCCAAGAGCAAACCTACTGCTTTCCAGTCCTTCT
CCGAATCTTTTAGTGAAACATCTGCTAGAACATACGCACC
TGAGCTGAGGAAGCCCAAGTCTGATGGAAAGGATTTTGTG
AGTGACCTGAGTCCAGAGGAAACCATTAGGAGAATGCAGA
AAGGACGGGCTTTTTCTATGGAAAAGTTCCGCTCTCTGCA
GGACAAGCTTCTGCTGCTGGATGAAGCCGTTTCTGTTTAT
GATGGCAATGTCATCACTGCTGTGAGCTGCACATCACACT
CAATAACCCTATATGGAAAGACTGCTGTGGCTTTACAATG
ACTCATATTAGTAGGAACAGTGTTTTATTTATGTTGCTTA
ATCACTGATTATGTACATTTTCCTCCTGCAGGTCTTGATA
TATTTAAAAAAGTCATTAAGTAAAGAAATCCTCTTTCGAG
AGTTAATGCCGAGAGAAGTGGCTTTACGTCATTACATCCA
CTATTTGAAAGAGATGGGAGAGCAAAAGCTGTTGGTGGAG
TTACTGAAGGCTCTTGGCAGGACAGAAGATATGGCGTTAA
TGCAATACAAAGAGCACTTGAATATTAAGGATGAAGGCAG
AAGAAGAGACTTTCTCAAAAGTTGCCTCAGCCTTCCCTTT
TCTCAAGACGATTCCACTCATGTTCAAGATCACTATACCC
TCCTTGAAAGGCAAATAATCATTGAGGCTAGTGACAAGAA
GGCAGATACAGACATCTTTAAAAAGTTCCCCAGAAAAGCG
TCCATCCTTAATATGCCAATCATCACCACTCTGTATTACT
CCTGCTTCTACCATTACGGAGAGCCAGAGGGAACTTTTAG
CAGCCCTTCGAACATTAGAAAAACCTTCAGGATTTCAGAA
AAGCAGTACATTACCACAGCTCTTGGTGCGAGAGCAAAGT
TGAAATCGTGGTTTGATGTGGATAGTCTGTTTAACACCAA
GAACTGGCTGGGCTACACCAAAAAAAGATCTCCCATCGCC
TTTCACAGAGTGGTGGACATCCTGCAAAAGAACAGTGCCC
CTGTGCAGGTGCTGCAGGAGTATGTGAACCTCATCGATGA
CCCAGAACTCAAGCTCAGTGTGGCGCTCAAATATAAATGC
CATGACATCATCATCAATACATACAGAGACCTAAAGGATC
GACAGCAGCTGATAGTGTACAGAGAAAAGCTAGAGCGAGA
CTCACCTGAATACAGGAAGATTCAGGAACTCCTCAACAAC
GGGCAAATCAGATGGAAAAACTGACACAAGTCTTAAATGA
GGCAGTGGTTGAAAAGTATTGTGTCAAAACTCTCTCAGAG
ACGATATTACACACTATCAAGCTGCTCAATATGGAGACGG
TTTTAGGATTAAACCTGGACATCCTTCAGAAATTTCAAAG
AATCATCACGAGGAGTCATTCTGGAGTGATTCGTTCGCAA
GTGTGATTGAACTGCCAAGTGTCCTTCTGCCAACTCTACA
GGTGAACATTCATAATGAAACAAGGGAGGCTGTTGGTGGT
TACTTTCGTGATCAACATGAAATTCAGTTTTGTTTGCCCA
TGTGTACATTATTGAGCATTCCACATCATTTTTTATATTA
AATAATATAAAACACTGA

OTTDART00000005163 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000005163|OTTDARG00000004803|ZDB-GENE-040520-1 vipas39|OTTDARP00000047693 vipas39-002 LG_ FQ377663.3 Danio rerio protein_coding KNOWN, 1938 bp
AGATGACACGAGCCAAACCTGAGGATGATGAGTACTGGAA
CAGCTCCAAATTCAAAGCCTTCACCTTCGATGATGAAGAC
GATGAGTTTTCACGGCTGAAAGAGTCCAAACGGGCAGTGA
ACAGCATCCTGGTGGATGATGATGATGATGAAGACGATGT
TGAGAAAGTGAGCTGGAGCGGGGAACCTGTGGGAAGCATC
TCTTGGTCAGTGAGGGAAACTGCCTCCAGTATCCGCTCTG
GGAGTGAGCAGAACTTTCCCAAAATCGATACCGCCCCTTC
ACTGTCCAAACAGGGCTCTGGATACTCCCTGAGCTCGCTG
TTTAAAGCCAAGAGCAAACCTACTGCTTTCCAGTCCTTCT
CCGAATCTTTTAGTGAAACATCTGCTAGAACATACGCACC
TGAGCTGAGGAAGCCCAAGTCTGATGGAAAGGATTTTGTG
AGTGACCTGAGTCCAGAGGAAACCATTAGGAGAATGCAGA
AAGGACGGGCTTTTTCTATGGAAAAGTTCCGCTCTCTGCA
GGACAAGCTTCTGCTGCTGGATGAAGCCGTTTCTGTTTAT
GATGGCAATGTCATCACTGCTGTGAGCTGCACATCACACT
CAATAACCCTATATGGAAAGACTGCTGTGGCTTTACAATG
ACTCATATTAGTAGGAACAGTGTTTTATTTATGTTGCTTA
ATCACTGATTATGTACATTTTCCTCCTGCAGGTCTTGATA
TATTTAAAAAAGTCATTAAGTAAAGAAATCCTCTTTCGAG
AGTTAATGCCGAGAGAAGTGGCTTTACGTCATTACATCCA
CTATTTGAAAGAGATGGGAGAGCAAAAGCTGTTGGTGGAG
TTACTGAAGGCTCTTGGCAGGACAGAAGATATGGCGTTAA
TGCAATACAAAGAGCACTTGAATATTAAGGATGAAGGCAG
AAGAAGAGACTTTCTCAAAAGTTGCCTCAGCCTTCCCTTT
TCTCAAGACGATTCCACTCATGTTCAAGATCACTATACCC
TCCTTGAAAGGCAAATAATCATTGAGGCTAGTGACAAGAA
GGCAGATACAGACATCTTTAAAAAGTTCCCCAGAAAAGCG
TCCATCCTTAATATGCCAATCATCACCACTCTGTATTACT
CCTGCTTCTACCATTACGGAGAGCCAGAGGGAACTTTTAG
CAGCCCTTCGAACATTAGAAAAACCTTCAGGATTTCAGAA
AAGCAGTACATTACCACAGCTCTTGGTGCGAGAGCAAAGT
TGAAATCGTGGTTTGATGTGGATAGTCTGTTTAACACCAA
GAACTGGCTGGGCTACACCAAAAAAAGATCTCCCATCGCC
TTTCACAGAGTGGTGGACATCCTGCAAAAGAACAGTGCCC
CTGTGCAGGTGCTGCAGGAGTATGTGAACCTCATCGATGA
CCCAGAACTCAAGCTCAGTGTGGCGCTCAAATATAAATGC
CATGACATCATCATCAATACATACAGAGACCTAAAGGATC
GACAGCAGCTGATAGTGTACAGAGAAAAGCTAGAGCGAGA
CTCACCTGAATACAGGAAGATTCAGGAACTCCTCAACAAC
GGGCAAATCAGATGGAAAAACTGACACAAGTCTTAAATGA
GGCAGTGGTTGAAAAGTATTGTGTCAAAACTCTCTCAGAG
ACGATATTACACACTATCAAGCTGCTCAATATGGAGACGG
TTTTAGGATTAAACCTGGACATCCTTCAGAAATTTCAAAG
AATCATCACGAGGAGTCATTCTGGAGTGATTCGTTCGCAA
GTGTGATTGAACTGCCAAGTGTCCTTCTGCCAACTCTACA
GGTGAACATTCATAATGAAACAAGGGAGGCTGTTGGTGGT
TACTTTCGTGATCAACATGAAATTCAGTTTTGTTTGCCCA
TGTGTACATTATTGAGCATTCCACATCATTTTTTATATTA
AATAATATAAAACACTGA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations