Transcript

lpcat1-204

ID

ZDB-TSCRIPT-090929-3943

Name

lpcat1-204 Nomenclature History

Previous Names

lpcat1-001

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

lpcat1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000150932 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000150932.2|gene_biotype:protein_coding|ENSDARG00000011506.13 transcript_biotype:nonsense_mediated_decay gene_symbol:lpcat1 cdna chromosome:GRCz11:19:28331227:28334164:1
CATGGGATGATGGATGTGAGAGAATACGTCATCGCTCTGT
CAGTGGTTTGTAGACCTTTCAGATATCTGGACACCGTTAA
ACTGGCCTTCAGGATGTTTGAAGCACAGGAGGACGGAGCT
ATTGTTGAAGACGAACTGACCGTCATTCTAAAAACTGCTC
TGGGAGTTGGAGATCTTGCTGTTTCTGAACTCTTCAGGGC
CATAGATAGCCAAGACAAGGGAAAGATCACATTTGATGAA
TTGTGCAGCTTCATGGAGAAATGCCCTGATTTGGTGGAGC
AGTATCACTGTCTCTGTGAGTCAATCTCTCAGCACTCCAG
AGAATCCACATCTTCAAGTAACGGCTTCTGTGCTGACTTC
AGCCCCCGAAATCACAGCAAGAAACAGGACTAAACATGGC
TTTACCATCACAGCCTGTCACCCTCAGTGTGTGACGCTGT
TTTCCTGTGTGCACCAAGAGAGGAACTTATCTTCAAGGCG
CTTCGTTTTTCTGACAGATCTTAAGAATGGAAACGAAACT
GACTTTATTTTAATGCCTTATGTTCTTTTTTTGACAGAGA
GATTTTCACAGTTTTTCTATATAAAGCGTTGCTTGCTTTA
AAAGATTGCAATTTTTAATATGCGCAAAATAAATAAATAA
AAAAACCACGCCAACAACATACAAAAAA

OTTDART00000017880 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000017880|OTTDARG00000014942|ZDB-GENE-060503-915 lpcat1|OTTDARP00000015110 lpcat1-001 LG_ BX571830.6 Danio rerio protein_coding KNOWN, 668 bp
CATGGGATGATGGATGTGAGAGAATACGTCATCGCTCTGT
CAGTGGTTTGTAGACCTTTCAGATATCTGGACACCGTTAA
ACTGGCCTTCAGGATGTTTGAAGCACAGGAGGACGGAGCT
ATTGTTGAAGACGAACTGACCGTCATTCTAAAAACTGCTC
TGGGAGTTGGAGATCTTGCTGTTTCTGAACTCTTCAGGGC
CATAGATAGCCAAGACAAGGGAAAGATCACATTTGATGAA
TTGTGCAGCTTCATGGAGAAATGCCCTGATTTGGTGGAGC
AGTATCACTGTCTCTGTGAGTCAATCTCTCAGCACTCCAG
AGAATCCACATCTTCAAGTAACGGCTTCTGTGCTGACTTC
AGCCCCCGAAATCACAGCAAGAAACAGGACTAAACATGGC
TTTACCATCACAGCCTGTCACCCTCAGTGTGTGACGCTGT
TTTCCTGTGTGCACCAAGAGAGGAACTTATCTTCAAGGCG
CTTCGTTTTTCTGACAGATCTTAAGAATGGAAACGAAACT
GACTTTATTTTAATGCCTTATGTTCTTTTTTTGACAGAGA
GATTTTCACAGTTTTTCTATATAAAGCGTTGCTTGCTTTA
AAAGATTGCAATTTTTAATATGCGCAAAATAAATAAATAA
AAAAACCACGCCAACAACATACAAAAAA

Related Transcripts

Transcripts related to lpcat1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lpcat1-204	Ensembl	668 nt
aberrant processed transcript	lpcat1-205 (1) Ensembl	Ensembl	820 nt	Select Tool
mRNA	lpcat1-201 (1) Ensembl	Ensembl	2,050 nt	Select Tool
mRNA	lpcat1-202 (1) Ensembl	Ensembl	798 nt	Select Tool
mRNA	lpcat1-206 (1) Ensembl	Ensembl	2,027 nt	Select Tool ZFIN BLAST
ncRNA	lpcat1-002 (1) Ensembl	Ensembl	505 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations