Transcript

clk2a-005

ID

ZDB-TSCRIPT-090929-3594

Name

clk2a-005 Nomenclature History

Previous Names

si:ch211-81a5.7-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

clk2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000135285 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000135285.2|gene_biotype:protein_coding|ENSDARG00000062954.8 transcript_biotype:retained_intron gene_symbol:clk2a cdna chromosome:GRCz11:19:9150014:9156006:1
AAGACGCGTCGGGAGGAGGGGCCGGAAGTGTTTTTTTCTT
CACCGTTTAATAATTAGACTTGAGTGAGAATTTGGGATCC
GAAGCGTCAACACGGATTTTCTTTGGGATAAACGGACAGG
GCTGGCTGCACAAACGATGCCACACTCCAGGCGGTATCCG
TCCTCGGAGAGGGCCAGCCGCAGCAGCTACCAAGATCGAT
ATAGAGAGCGGGACAGAGACAGAGATCGAGGAAGAAAACC
TCGACATCGCCGCTCTCCAACCTATTCTTCCAGCAGTGAA
CGTGAGAGGAGAGCGAGAGGACACAGACAGGACACCGGCT
ATGCCAGATCCAGGAGCTACGACAACCGTTCTTCAGACCG
CAGGCCATACGACAGACACTACGGCGAGAGCTACCGGCGC
TTGGACCACAGCAGGGAACGGGACAGGGATCAAAACAGGG
ATCACCGGACGCCGAGCAACTACTACTCTCGCGACGCCTC
GCCCAGCTACGACTTTCGCCGGGGACGCGACCGGGACCGC
GAGGACTCATACCGGAGGAAAGGCAGCAGGCGTAAGCACA
AACGAAGGCGGCGTAGAACCAGGTCCTATAGCGCATCCTC
CTCGGTGAGTACTTCAATACCCAAGCCTGCTCTTTCCCTC
CCCAAATCCCTTCTTCTCTCTCCACCTCTACACGCTCCTG
TCTCTCTTTCCCCATAACGCTGTTCTTTTCCACAGCCCCA
GGATTTGGTAAGTATGAACTCCTTTGTTTTATGTTCTTCT
TTTTGTTGATGTTTTGTCTTTTTTTAAATAGTGATAGTCC
ATATGTTGGCTTTCAGTGTTTTATAATGGAATTGG

OTTDART00000016926 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000016926|OTTDARG00000014168|ZDB-GENE-030131-298 clk2a|no_translation CH211-81A5.7-005 LG_ CR626935.6 Danio rerio protein_coding KNOWN, 835 bp
AAGACGCGTCGGGAGGAGGGGCCGGAAGTGTTTTTTTCTT
CACCGTTTAATAATTAGACTTGAGTGAGAATTTGGGATCC
GAAGCGTCAACACGGATTTTCTTTGGGATAAACGGACAGG
GCTGGCTGCACAAACGATGCCACACTCCAGGCGGTATCCG
TCCTCGGAGAGGGCCAGCCGCAGCAGCTACCAAGATCGAT
ATAGAGAGCGGGACAGAGACAGAGATCGAGGAAGAAAACC
TCGACATCGCCGCTCTCCAACCTATTCTTCCAGCAGTGAA
CGTGAGAGGAGAGCGAGAGGACACAGACAGGACACCGGCT
ATGCCAGATCCAGGAGCTACGACAACCGTTCTTCAGACCG
CAGGCCATACGACAGACACTACGGCGAGAGCTACCGGCGC
TTGGACCACAGCAGGGAACGGGACAGGGATCAAAACAGGG
ATCACCGGACGCCGAGCAACTACTACTCTCGCGACGCCTC
GCCCAGCTACGACTTTCGCCGGGGACGCGACCGGGACCGC
GAGGACTCATACCGGAGGAAAGGCAGCAGGCGTAAGCACA
AACGAAGGCGGCGTAGAACCAGGTCCTATAGCGCATCCTC
CTCGGTGAGTACTTCAATACCCAAGCCTGCTCTTTCCCTC
CCCAAATCCCTTCTTCTCTCTCCACCTCTACACGCTCCTG
TCTCTCTTTCCCCATAACGCTGTTCTTTTCCACAGCCCCA
GGATTTGGTAAGTATGAACTCCTTTGTTTTATGTTCTTCT
TTTTGTTGATGTTTTGTCTTTTTTTAAATAGTGATAGTCC
ATATGTTGGCTTTCAGTGTTTTATAATGGAATTGG

Related Transcripts

Transcripts related to clk2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	clk2a-205 (1) Ensembl	Ensembl	2,192 nt	Select Tool
mRNA	clk2a-201 (1) Ensembl	Ensembl	2,292 nt	Select Tool
mRNA	clk2a-202 (1) Ensembl	Ensembl	2,336 nt	Select Tool
ncRNA	clk2a-004 (1) Ensembl	Ensembl	597 nt	Select Tool
ncRNA	clk2a-005	Ensembl	835 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations