Transcript

clk2a-205

ID
ZDB-TSCRIPT-090929-3585
Name
clk2a-205 Nomenclature History
Previous Names
  • clk2a-001
  • si:ch211-81a5.7-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000142910 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000142910.3|gene_biotype:protein_coding|ENSDARG00000062954.8 transcript_biotype:nonsense_mediated_decay gene_symbol:clk2a cdna chromosome:GRCz11:19:9150094:9169225:1
GAAGCGTCAACACGGATTTTCTTTGGGATAAACGGACAGG
GCTGGCTGCACAAACGATGCCACACTCCAGGCGGTATCCG
TCCTCGGAGAGGGCCAGCCGCAGCAGCTACCAAGATCGAT
ATAGAGAGCGGGACAGAGACAGAGATCGAGGAAGAAAACC
TCGACATCGCCGCTCTCCAACCTATTCTTCCAGCAGTGAA
CGTGAGAGGAGAGCGAGAGGACACAGACAGGACACCGGCT
ATGCCAGATCCAGGAGCTACGACAACCGTTCTTCAGACCG
CAGGCCATACGACAGACACTACGGCGAGAGCTACCGGCGC
TTGGACCACAGCAGGGAACGGGACAGGGATCAAAACAGGG
ATCACCGGACGCCGAGCAACTACTACTCTCGCGACGCCTC
GCCCAGCTACGACTTTCGCCGGGGACGCGACCGGGACCGC
GAGGACTCATACCGGAGGAAAGGCAGCAGGCGTAAGCACA
AACGAAGGCGGCGTAGAACCAGGTCCTATAGCGCATCCTC
CTCGATGAGATTGTCAGCACTTTGGGTGAGGGCACCTTCG
GGAGGGTGATGCAATGTATTGATCATCGCAGGGGTGGAGC
ACATGTCGCTCTGAAGATCATCAAAAATGTGGAGAAGTAC
AAAGAGGCTGCCCGCCTGGAGATCAACGTACTGGAAAGAA
TCAACGAAAAGGATCCTGAGAATAATAATCTGTGTGTGCA
GATGTTTGACTGGTTTGATTACCATGGCCATATGTGCATC
AGTTTCGAACTCTTGGCTCTCAGCACTTTTGATTTCCTCA
AAGAAAACAACTACCTGCCGTACTCCATCAACCAAGTCCG
TCATATGGCCTACCAGGTCTGCCTGGCTGTCAAATTTTTA
CATGAAAACAAACTGACACACACAGATCTGAAACCAGAAA
ACATCCTGTTTGTGAACTCGGACTACACAGTCACGTATAA
TGTTGAGAAGAAACGAGATGAGCGAACTGTGAAGAACACA
GCAGTGAGAGTGGTTGATTTCGGCAGCGCTACCTTTGACC
ATGAGCACCACAGCACCATTGTTTCCACCAGACACTACAG
AGCTCCTGAAGTTATTTTAGAACTGGGTTGGAGTCAGCCG
TGTGACGTATGGAGTATTGGCTCCATCCTCTTCGAGTACT
ACCTCGGCTTCACCCTCTTCCAGACTCATGATAATCGGGA
GCATTTAGCTATGATGGAGAGAATTCTGGGCCCTGTTCCT
TCCCGGATGATTCGGAAAACTAGGAAACAGAAGTACTTTT
ATCGTGGACGCCTGGACTGGGATGAGAACTCTTCAGCAGG
AAGATACGTCAGAGAAAACTGCAAACCTTTACGGCGATAT
CTTCTGTCTGAAGCTGAGGAGCATCACCAGCTGTTCGACC
TGATCGAGGCCATGCTGGAGTACGAGCCATCGAAGCGTCT
GACTCTTGCTGCAGCTCTCAGGCATCCGTTTTTCCAGAGC
GGCATCAGCAGCAGCGAACTGAGCGCAGGTAAGAGCTGGG
AGGCAAACCGTGACATCAGCCGGTGACACTGACACTCTCG
TCTTCAACCAACGCCAAAAAAAAGGACTCGCATGCCGACA
GGATTACATGGAGCTGGACTGACGTTCGTTTTGTAGAGCA
AGAGATAATAAAGCCATGAGTTTTCTGTCATCCTTCCATA
ATGTGAGGACAGCTCCATGTCAGCAATGAAAATGTGAAGA
AGATCCCAGAAAACAGTCATGACTGATTGGACAATGGGGA
ATGGGAATGAGTTTCAGTTCTTCCAGCCAATTTGGCCAAT
TTTTGGACTTCCACAAGTGGTGTGATGGTCAAAAGCATTA
ACTTAACACTCCATTTTTGAAAATAACTGACGAAATGAGT
ATCGCTGTTACAGCTGAGGGGGATACGTTTTGCGCATTTT
TAGCGATCAGCTGAAAATCAAAAATGCGACAACGTTTGTA
TTCAGTTCACTTCAAACCAAGTAAGCGAGAGCAAGAGCGT
CCCTCAGCACACGTTTACAGTATTTATTTAGATAAATAGC
ATCTCTTTTTTTGTGTCTTTGTATGGATCCGATTGTATAA
ATATGTGTAAATATGAATAAATATATGTTGTGACTATAGA
ATAAAGGGGCTGTCTGTGTGCTTGCTGTGAATGGGTTTTC
ACAGCGGTTCTACAGGCAAAATGTTTTTACAA

OTTDART00000016914 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000016914|OTTDARG00000014168|ZDB-GENE-030131-298 clk2a|OTTDARP00000014337 CH211-81A5.7-001 LG_ CR626935.6 Danio rerio protein_coding KNOWN, 2192 bp
GAAGCGTCAACACGGATTTTCTTTGGGATAAACGGACAGG
GCTGGCTGCACAAACGATGCCACACTCCAGGCGGTATCCG
TCCTCGGAGAGGGCCAGCCGCAGCAGCTACCAAGATCGAT
ATAGAGAGCGGGACAGAGACAGAGATCGAGGAAGAAAACC
TCGACATCGCCGCTCTCCAACCTATTCTTCCAGCAGTGAA
CGTGAGAGGAGAGCGAGAGGACACAGACAGGACACCGGCT
ATGCCAGATCCAGGAGCTACGACAACCGTTCTTCAGACCG
CAGGCCATACGACAGACACTACGGCGAGAGCTACCGGCGC
TTGGACCACAGCAGGGAACGGGACAGGGATCAAAACAGGG
ATCACCGGACGCCGAGCAACTACTACTCTCGCGACGCCTC
GCCCAGCTACGACTTTCGCCGGGGACGCGACCGGGACCGC
GAGGACTCATACCGGAGGAAAGGCAGCAGGCGTAAGCACA
AACGAAGGCGGCGTAGAACCAGGTCCTATAGCGCATCCTC
CTCGATGAGATTGTCAGCACTTTGGGTGAGGGCACCTTCG
GGAGGGTGATGCAATGTATTGATCATCGCAGGGGTGGAGC
ACATGTCGCTCTGAAGATCATCAAAAATGTGGAGAAGTAC
AAAGAGGCTGCCCGCCTGGAGATCAACGTACTGGAAAGAA
TCAACGAAAAGGATCCTGAGAATAATAATCTGTGTGTGCA
GATGTTTGACTGGTTTGATTACCATGGCCATATGTGCATC
AGTTTCGAACTCTTGGCTCTCAGCACTTTTGATTTCCTCA
AAGAAAACAACTACCTGCCGTACTCCATCAACCAAGTCCG
TCATATGGCCTACCAGGTCTGCCTGGCTGTCAAATTTTTA
CATGAAAACAAACTGACACACACAGATCTGAAACCAGAAA
ACATCCTGTTTGTGAACTCGGACTACACAGTCACGTATAA
TGTTGAGAAGAAACGAGATGAGCGAACTGTGAAGAACACA
GCAGTGAGAGTGGTTGATTTCGGCAGCGCTACCTTTGACC
ATGAGCACCACAGCACCATTGTTTCCACCAGACACTACAG
AGCTCCTGAAGTTATTTTAGAACTGGGTTGGAGTCAGCCG
TGTGACGTATGGAGTATTGGCTCCATCCTCTTCGAGTACT
ACCTCGGCTTCACCCTCTTCCAGACTCATGATAATCGGGA
GCATTTAGCTATGATGGAGAGAATTCTGGGCCCTGTTCCT
TCCCGGATGATTCGGAAAACTAGGAAACAGAAGTACTTTT
ATCGTGGACGCCTGGACTGGGATGAGAACTCTTCAGCAGG
AAGATACGTCAGAGAAAACTGCAAACCTTTACGGCGATAT
CTTCTGTCTGAAGCTGAGGAGCATCACCAGCTGTTCGACC
TGATCGAGGCCATGCTGGAGTACGAGCCATCGAAGCGTCT
GACTCTTGCTGCAGCTCTCAGGCATCCGTTTTTCCAGAGC
GGCATCAGCAGCAGCGAACTGAGCGCAGGTAAGAGCTGGG
AGGCAAACCGTGACATCAGCCGGTGACACTGACACTCTCG
TCTTCAACCAACGCCAAAAAAAAGGACTCGCATGCCGACA
GGATTACATGGAGCTGGACTGACGTTCGTTTTGTAGAGCA
AGAGATAATAAAGCCATGAGTTTTCTGTCATCCTTCCATA
ATGTGAGGACAGCTCCATGTCAGCAATGAAAATGTGAAGA
AGATCCCAGAAAACAGTCATGACTGATTGGACAATGGGGA
ATGGGAATGAGTTTCAGTTCTTCCAGCCAATTTGGCCAAT
TTTTGGACTTCCACAAGTGGTGTGATGGTCAAAAGCATTA
ACTTAACACTCCATTTTTGAAAATAACTGACGAAATGAGT
ATCGCTGTTACAGCTGAGGGGGATACGTTTTGCGCATTTT
TAGCGATCAGCTGAAAATCAAAAATGCGACAACGTTTGTA
TTCAGTTCACTTCAAACCAAGTAAGCGAGAGCAAGAGCGT
CCCTCAGCACACGTTTACAGTATTTATTTAGATAAATAGC
ATCTCTTTTTTTGTGTCTTTGTATGGATCCGATTGTATAA
ATATGTGTAAATATGAATAAATATATGTTGTGACTATAGA
ATAAAGGGGCTGTCTGTGTGCTTGCTGTGAATGGGTTTTC
ACAGCGGTTCTACAGGCAAAATGTTTTTACAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations