Transcript

csde1-202

ID
ZDB-TSCRIPT-090929-15998
Name
csde1-202 Nomenclature History
Previous Names
  • csde1-001
  • si:ch211-261n11.2-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000134542 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000134542.3|gene_biotype:protein_coding|ENSDARG00000074758.5 transcript_biotype:protein_coding gene_symbol:csde1 cdna chromosome:GRCz11:8:22521729:22542545:-1
GTCCCACAGTTCACACGGTATTGTTTTAATATCGCGAGAG
TTCGCACACTGCTCACTACGTAATGTGCCGTGCTGCTTAT
GGCGGCGCTGGTGACAGTGCTGAAAGCTGTTGGGTATGAA
GTGAAACTGAATTGAATTTTGTACCATCTGAAACCTACTT
CAAGTTCAGATCATCGATCGGTCAGAAGAAACGTCAAGGA
AAAAGAAAACCTACTAACATCTCTAAAACGACCCAACGGT
ACAACAACTTTGAAGAAGAGACCAAGACGAAGACCTGCAC
TGCTACAAACGAGAAAATCTAAAGCAACACGAAGCAACCA
AACGAGCAAACCAAAGATTTAAGAAACAGAACCAGGCCGC
AACAAGCGTAGCAACCATCAACGTTAACAGCAAAGGCGAG
ACCTGATCTGAGACAAGAAGTTTGTGCCTACTCAACAGCT
TTGAAAAAGCACACGTCCCAACGCTGCACCAAGCCCTCCT
CATCCTCCCCGCACCTCTTCCTCCTCTGGGGTGCGGAGAG
GGCTGCTGTCTGCTAGTCTTTTCAGTTTTGAGCTTTTTCT
TTGTCAATTGTTGACCGAATCCCACCTTGTAATCTCAGTT
TTTCCCCATTTTGCCCAGTCTTTCTCTTGTATTTCTGTTC
ACTTTTTTTCCTCAAAAGCAGTGTTCAAACACTTGCATTT
GCCTTTTTATTTGACTTTTTTGCCATTTATTTTTGCAACT
TTTTATAATTAGAACGTGTGCCAGAGAGCTGAACCTTACA
AGTGTGTGTGCATGCGCGTGTGTGACCAGAGTCTGAAGCA
TCGATTGATTGATTGATCTATCCAAATCATTACAGCCTTC
CAAGACAACAGAACAAGATGAGTTTTGACCCCAGTCTGCT
GCATAATAATGGCCATAGTGGCTTTGCCAATGGAACTAGT
ATGGGAATTCGTGAGACTGGAGTAGTTGAAAAACTGCTCA
CATCTTATGGCTTCATTCAATGCTCTGAGAGACAGGCCCG
TCTCTTCTTCCACTGCTCTCAATATAACGGCAACCTGCAG
GAGCTTAAAATTGGAGATGATGTGGAGTTCGAGGTGTCGT
CTGATAGGCGCACTGGCAAACCAATTGCAGTGAAGCTGGT
AAAAATCAAGGCAGAAATGTTGCCAGAAGAGCGAATTTCT
GGGCAGGTAGTGTCAGCTATCCCTTCTCATCTGGATGGGA
AGTCTGCACCTGGCCAATTGCCCACAGGCAGTGTGTGTTA
TGAGAGGAACGGGGAAGTGTTTTATTTGACCTACACCCTA
GAAGATGTGGAAGGAAACGTTTCTTTAGATATTGGTGATA
AAGTTAGTTTTTACATGGAGACCAACAAGCATACTGGTGC
TGTTAGTGCCCACAACATTGTTTTGGTGCAGAAAAAAGAG
TCAAGATGTCAGGGAGTGGTTTGTGCTACCAAGGAGGCCT
TTGGATTCATTGAGCGAGGGGATGTTGTGAAGGAAATCTT
TTTCCACTACAGTGAGTTTAAAGGAGACCTGGAGGCTTTA
CAAGCTGGAGACGATGTGGAATTCACCATTAAAGAAAGAA
ACGGAAAGGAAGTGGCCACAGATGTGAGACTGTTGCCTCA
AGGCACTGTTATATTTGAGGACATTAGCATTGAGACCTTC
GAGGGCACTGTCAGTAAGGTTATTCCCAAGGTCCCCACAA
AGAATCAGAACGACCCTCTTCCTGGGAGAATCAGTGCCAG
AATCAATTTTACTGACAAAGAGCTGCTATTTGGGGAGAAG
GACACCAAGTCCAAAGTGACGCTGCTTGAGGGCGATCATG
TCCAGTTCAATATATCCACTGACCGTCGCGACAAACTGGA
GAGAGCGACAAATATTGACATCCTCCCTGACACCTTCCAT
TTCACAAAGGAGACCCGTGAAATGGGTGTGATAGCTGCCA
TGCGTGATGGTTTTGGCTTCATCAAATGTGTGGACCGTGA
TGCCCGGATGTTCTTCCATTTCAGCGAAGTTTTGGAAGAG
AGCCAACTGCACATTTCTGATGAAGTGGAATTCACTGTTG
TCCCTGACATGCTGTCAGCCCAAAGGAACCATGCTGTGCG
GATCAAAAAGCTGCCCAAGGGCACAGTGTCTTTCCACACT
CAATCTGAGCTGCGTTTTATGGGAGTGGTGGAGAAAGAAG
CCATACCTGCCATCACCATCAAGAACTCCAGCCCCAGCAA
GGGCAAAGAGAAGGATGCTGAGGAAGGCTTGATTGCATAT
GAAGATGTTGGAGTAAAGACCACCCTTCCCTACCATATTA
AAGACCTTGAAGGTGGTGTTTATCCACAGCTTGGAGACAA
GGTGGAGTTCTCCATCAGTGAAGTAAAACGCACTGGACAG
CAAAGTGCTGTGTCCTTCAAGATTCTTAACCGCGCAGTTG
GCTCCAAGAGGCTGCTGGGATACATAGCAACTCTAAAGGA
TAACTTTGGCTTCATAGAAACAGCCAATCACGATCAGGAG
ATCTTCTTCCACTACAGTGAGGTTTGTGGGGATGTGGATA
GCTTTGATCTTGGAGATACGGTGGAGTACACTCTCTCCAA
GGGCAAAGGAAACAAAATCAGTGCAGAGAAGGTCACCAAA
ATTGCCGCTGTGAATGGAGTTGGAGAGGATGTGAGCACTA
CAGTGTCCCTGGGAAAGGTGGTTCGGCCGCTGCGCAGTGT
GGACCCGTCTCAGACTGAATATCAAGGCCTTATTGAGATC
ACGGAGGATGGGTCCAATAAGGGACAGAGTTATCCTTTCG
GCATTGTTGGTATGGCCAATAAAGGTGACTGTTTACAAAA
GGGCGAGTTGGTGAAGTTTCAGTTGTGTACGGTGGCACAG
ACAGGACAAAAGATGGCCTGCAACATCATGCCTCAGCGCA
GAGCCCTGGTGGAGTGTGTTAAAGATCAGTTTGGTTTCAT
CACGTATGAAGTTGGAGAAAGCAAGAAGTTGTTTTTCCAC
GTCAAGGAGGTGCAGGACAGTCTGGAGCTGCAGGCTGGTG
ATGAAGTGGAGTTTTCGGTTATCTTGAACCAGCGTACGGG
CAAATGTAGTGCCTGTAATGTTCGCAGAGTCAGTGAGGGT
CCAAAACCAGTAGCAACACCTCGGCCTGACAGACTTGTCA
ATCGCTTGAAGAGCATCACTCTGGATGACTCCAACGCTCC
TCGTCTCGTCATCATTAGACAGCCTCGTGGCCCTGATAAT
TCAAAGGGCTTTAGTGTAGAGAGAAAATCCCGCCAGCCTG
GTGTTATTGACTGAGTACTGTTCACCCCTCTTGTCCTTAC
AATAGAAGGAACACCTTGAAGAAAAGCAATCAGATGGTCA
GAGGAAGGGATTTATGCGTGTTCGTCTCGCTTGCATTTTC
TCTCTCACCCATTAACACATCACAGAGTAACAAAGGCATC
AAGACTTGAAAATTAGCACCCACAAGTCCCTTCCTTTGTC
AAAGGATCCCGTGCAAAAAAACAACAAAAAATCATCTCAT
GGTCTTCATTGTATGTGTGTTGTTTGGTTGTAATTTGAGC
AAAAAGCCCTTGTGTTGTATGAGCGTGTGTGTGTGTGTGT
GTGTGGTATGCATCCCGTTTGGAGAAAACTGTAAGGTTGT
TCTTGTCATGCAGAGGATATGAGGGGAAGTAAGGGGTTTG
AAGTTTTCTCATCTTTTTGGATGGAGATGTGAAGACTCGA
CCCGTTTTTCTTTTCTGCTGAAATCAAAATGCCAGGAATT
CTGCACCTGCTGCAGTGTGAGTGAGGTCTTGTTTTAAAGT
AGCTCTGACTGTCTGTATTTTGACTTCCGTTATATATATA
CTTTATTTTTCCTGTATCACTTGAATTCCTCTCCCAATGT
CGGGTTTCTCACCCTGGTGATTTTGCTGGGCTTTTTCTGG
TGAGAAATAAAATGACTTTTAATGTGCGCTCGTTTTCCAT
ACCCAATACAGTTAAATAGCTTTTTAACATGGATCTAAAA
ACTAAATAAATTGTCTTGCTGCATTCGTTATTCTCTCATG
TATGGTTTTTGATTGCCTTTTAATTATTTTCTAATTAAAT
TGGCTTTTTTTGTATTGCTGTCTTGATTTTACAAGTTCCT
TTTTTGGGCAAGTGCAGAATTCCTATTGGCATCTTGTAGC
CTGCGGTCTTTTTATATAGGCTTTTTTTTTTTCCTTTTTC
TTTGAGTTTTACTTTAACTCAGTGTCTGCTAATGAATAAA
GGAAGAAGGTGCCTAAAAACAAAAAATAAAATAAAAATTG
GTGTCGTCTCTATCCCTAAATTGCCACTAAAATATGAGCA
AGTAGGGTGGCCTTTTTTTTTTTTTCTTTTCTCCAAGTAG
AAAATACTGGCGTGCATCCCCCGATCCCTATGGGTTGAAA
TGTACTCTATGTAATGTGTGCTTTTACTTGGGTGGATTTT
TTTGAAAACCTAAATAAAATGGGCAAATGTGTGCAGCACT
TGGGGGATGTGTAATCCAAAAAACTCAAACATGCAGAGAA
ACTTGATTATGGATAGAGGCTATTTGCAGTGCTTCTTATG
ACAAATGGAGCTATTACTGTCATAAACATTCTCTGGAGCA
CCCTGGGTTTGTGTTGAACCTCAAGGTTCTCCTATATACT
TTTGTTAATGGTCTTGAATGAAACAATTGAAATAAACATT
TTATGAAAATCAAA

OTTDART00000035362 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000035362|OTTDARG00000026582|ZDB-GENE-030131-8623 csde1|OTTDARP00000028425 CH211-261N11.2-001 LG_ CT583651.7 Danio rerio protein_coding NOVEL, 4654 bp
GTCCCACAGTTCACACGGTATTGTTTTAATATCGCGAGAG
TTCGCACACTGCTCACTACGTAATGTGCCGTGCTGCTTAT
GGCGGCGCTGGTGACAGTGCTGAAAGCTGTTGGGTATGAA
GTGAAACTGAATTGAATTTTGTACCATCTGAAACCTACTT
CAAGTTCAGATCATCGATCGGTCAGAAGAAACGTCAAGGA
AAAAGAAAACCTACTAACATCTCTAAAACGACCCAACGGT
ACAACAACTTTGAAGAAGAGACCAAGACGAAGACCTGCAC
TGCTACAAACGAGAAAATCTAAAGCAACACGAAGCAACCA
AACGAGCAAACCAAAGATTTAAGAAACAGAACCAGGCCGC
AACAAGCGTAGCAACCATCAACGTTAACAGCAAAGGCGAG
ACCTGATCTGAGACAAGAAGTTTGTGCCTACTCAACAGCT
TTGAAAAAGCACACGTCCCAACGCTGCACCAAGCCCTCCT
CATCCTCCCCGCACCTCTTCCTCCTCTGGGGTGCGGAGAG
GGCTGCTGTCTGCTAGTCTTTTCAGTTTTGAGCTTTTTCT
TTGTCAATTGTTGACCGAATCCCACCTTGTAATCTCAGTT
TTTCCCCATTTTGCCCAGTCTTTCTCTTGTATTTCTGTTC
ACTTTTTTTCCTCAAAAGCAGTGTTCAAACACTTGCATTT
GCCTTTTTATTTGACTTTTTTGCCATTTATTTTTGCAACT
TTTTATAATTAGAACGTGTGCCAGAGAGCTGAACCTTACA
AGTGTGTGTGCATGCGCGTGTGTGACCAGAGTCTGAAGCA
TCGATTGATTGATTGATCTATCCAAATCATTACAGCCTTC
CAAGACAACAGAACAAGATGAGTTTTGACCCCAGTCTGCT
GCATAATAATGGCCATAGTGGCTTTGCCAATGGAACTAGT
ATGGGAATTCGTGAGACTGGAGTAGTTGAAAAACTGCTCA
CATCTTATGGCTTCATTCAATGCTCTGAGAGACAGGCCCG
TCTCTTCTTCCACTGCTCTCAATATAACGGCAACCTGCAG
GAGCTTAAAATTGGAGATGATGTGGAGTTCGAGGTGTCGT
CTGATAGGCGCACTGGCAAACCAATTGCAGTGAAGCTGGT
AAAAATCAAGGCAGAAATGTTGCCAGAAGAGCGAATTTCT
GGGCAGGTAGTGTCAGCTATCCCTTCTCATCTGGATGGGA
AGTCTGCACCTGGCCAATTGCCCACAGGCAGTGTGTGTTA
TGAGAGGAACGGGGAAGTGTTTTATTTGACCTACACCCTA
GAAGATGTGGAAGGAAACGTTTCTTTAGATATTGGTGATA
AAGTTAGTTTTTACATGGAGACCAACAAGCATACTGGTGC
TGTTAGTGCCCACAACATTGTTTTGGTGCAGAAAAAAGAG
TCAAGATGTCAGGGAGTGGTTTGTGCTACCAAGGAGGCCT
TTGGATTCATTGAGCGAGGGGATGTTGTGAAGGAAATCTT
TTTCCACTACAGTGAGTTTAAAGGAGACCTGGAGGCTTTA
CAAGCTGGAGACGATGTGGAATTCACCATTAAAGAAAGAA
ACGGAAAGGAAGTGGCCACAGATGTGAGACTGTTGCCTCA
AGGCACTGTTATATTTGAGGACATTAGCATTGAGACCTTC
GAGGGCACTGTCAGTAAGGTTATTCCCAAGGTCCCCACAA
AGAATCAGAACGACCCTCTTCCTGGGAGAATCAGTGCCAG
AATCAATTTTACTGACAAAGAGCTGCTATTTGGGGAGAAG
GACACCAAGTCCAAAGTGACGCTGCTTGAGGGCGATCATG
TCCAGTTCAATATATCCACTGACCGTCGCGACAAACTGGA
GAGAGCGACAAATATTGACATCCTCCCTGACACCTTCCAT
TTCACAAAGGAGACCCGTGAAATGGGTGTGATAGCTGCCA
TGCGTGATGGTTTTGGCTTCATCAAATGTGTGGACCGTGA
TGCCCGGATGTTCTTCCATTTCAGCGAAGTTTTGGAAGAG
AGCCAACTGCACATTTCTGATGAAGTGGAATTCACTGTTG
TCCCTGACATGCTGTCAGCCCAAAGGAACCATGCTGTGCG
GATCAAAAAGCTGCCCAAGGGCACAGTGTCTTTCCACACT
CAATCTGAGCTGCGTTTTATGGGAGTGGTGGAGAAAGAAG
CCATACCTGCCATCACCATCAAGAACTCCAGCCCCAGCAA
GGGCAAAGAGAAGGATGCTGAGGAAGGCTTGATTGCATAT
GAAGATGTTGGAGTAAAGACCACCCTTCCCTACCATATTA
AAGACCTTGAAGGTGGTGTTTATCCACAGCTTGGAGACAA
GGTGGAGTTCTCCATCAGTGAAGTAAAACGCACTGGACAG
CAAAGTGCTGTGTCCTTCAAGATTCTTAACCGCGCAGTTG
GCTCCAAGAGGCTGCTGGGATACATAGCAACTCTAAAGGA
TAACTTTGGCTTCATAGAAACAGCCAATCACGATCAGGAG
ATCTTCTTCCACTACAGTGAGGTTTGTGGGGATGTGGATA
GCTTTGATCTTGGAGATACGGTGGAGTACACTCTCTCCAA
GGGCAAAGGAAACAAAATCAGTGCAGAGAAGGTCACCAAA
ATTGCCGCTGTGAATGGAGTTGGAGAGGATGTGAGCACTA
CAGTGTCCCTGGGAAAGGTGGTTCGGCCGCTGCGCAGTGT
GGACCCGTCTCAGACTGAATATCAAGGCCTTATTGAGATC
ACGGAGGATGGGTCCAATAAGGGACAGAGTTATCCTTTCG
GCATTGTTGGTATGGCCAATAAAGGTGACTGTTTACAAAA
GGGCGAGTTGGTGAAGTTTCAGTTGTGTACGGTGGCACAG
ACAGGACAAAAGATGGCCTGCAACATCATGCCTCAGCGCA
GAGCCCTGGTGGAGTGTGTTAAAGATCAGTTTGGTTTCAT
CACGTATGAAGTTGGAGAAAGCAAGAAGTTGTTTTTCCAC
GTCAAGGAGGTGCAGGACAGTCTGGAGCTGCAGGCTGGTG
ATGAAGTGGAGTTTTCGGTTATCTTGAACCAGCGTACGGG
CAAATGTAGTGCCTGTAATGTTCGCAGAGTCAGTGAGGGT
CCAAAACCAGTAGCAACACCTCGGCCTGACAGACTTGTCA
ATCGCTTGAAGAGCATCACTCTGGATGACTCCAACGCTCC
TCGTCTCGTCATCATTAGACAGCCTCGTGGCCCTGATAAT
TCAAAGGGCTTTAGTGTAGAGAGAAAATCCCGCCAGCCTG
GTGTTATTGACTGAGTACTGTTCACCCCTCTTGTCCTTAC
AATAGAAGGAACACCTTGAAGAAAAGCAATCAGATGGTCA
GAGGAAGGGATTTATGCGTGTTCGTCTCGCTTGCATTTTC
TCTCTCACCCATTAACACATCACAGAGTAACAAAGGCATC
AAGACTTGAAAATTAGCACCCACAAGTCCCTTCCTTTGTC
AAAGGATCCCGTGCAAAAAAACAACAAAAAATCATCTCAT
GGTCTTCATTGTATGTGTGTTGTTTGGTTGTAATTTGAGC
AAAAAGCCCTTGTGTTGTATGAGCGTGTGTGTGTGTGTGT
GTGTGGTATGCATCCCGTTTGGAGAAAACTGTAAGGTTGT
TCTTGTCATGCAGAGGATATGAGGGGAAGTAAGGGGTTTG
AAGTTTTCTCATCTTTTTGGATGGAGATGTGAAGACTCGA
CCCGTTTTTCTTTTCTGCTGAAATCAAAATGCCAGGAATT
CTGCACCTGCTGCAGTGTGAGTGAGGTCTTGTTTTAAAGT
AGCTCTGACTGTCTGTATTTTGACTTCCGTTATATATATA
CTTTATTTTTCCTGTATCACTTGAATTCCTCTCCCAATGT
CGGGTTTCTCACCCTGGTGATTTTGCTGGGCTTTTTCTGG
TGAGAAATAAAATGACTTTTAATGTGCGCTCGTTTTCCAT
ACCCAATACAGTTAAATAGCTTTTTAACATGGATCTAAAA
ACTAAATAAATTGTCTTGCTGCATTCGTTATTCTCTCATG
TATGGTTTTTGATTGCCTTTTAATTATTTTCTAATTAAAT
TGGCTTTTTTTGTATTGCTGTCTTGATTTTACAAGTTCCT
TTTTTGGGCAAGTGCAGAATTCCTATTGGCATCTTGTAGC
CTGCGGTCTTTTTATATAGGCTTTTTTTTTTTCCTTTTTC
TTTGAGTTTTACTTTAACTCAGTGTCTGCTAATGAATAAA
GGAAGAAGGTGCCTAAAAACAAAAAATAAAATAAAAATTG
GTGTCGTCTCTATCCCTAAATTGCCACTAAAATATGAGCA
AGTAGGGTGGCCTTTTTTTTTTTTTCTTTTCTCCAAGTAG
AAAATACTGGCGTGCATCCCCCGATCCCTATGGGTTGAAA
TGTACTCTATGTAATGTGTGCTTTTACTTGGGTGGATTTT
TTTGAAAACCTAAATAAAATGGGCAAATGTGTGCAGCACT
TGGGGGATGTGTAATCCAAAAAACTCAAACATGCAGAGAA
ACTTGATTATGGATAGAGGCTATTTGCAGTGCTTCTTATG
ACAAATGGAGCTATTACTGTCATAAACATTCTCTGGAGCA
CCCTGGGTTTGTGTTGAACCTCAAGGTTCTCCTATATACT
TTTGTTAATGGTCTTGAATGAAACAATTGAAATAAACATT
TTATGAAAATCAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations