Transcript

rpf1-002

ID

ZDB-TSCRIPT-090929-11364

Name

rpf1-002 Nomenclature History

Previous Names

bxdc5-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

rpf1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147115 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000147115.2|gene_biotype:protein_coding|ENSDARG00000005738.12 transcript_biotype:retained_intron gene_symbol:rpf1 cdna chromosome:GRCz11:11:16104008:16115790:-1
GATTCTGTCACATGTGTGTGAAGACAGTGGCAGCTGAAAA
TGGATTGTACAGATTCAACATCTTCGGGACATGTTTCTAA
AAAAAAGAGCAAAACAAAGAAACTAAAGCGAACGATGAAA
GCCGTTAAAGCGCCAGTGGAAGAGATGGACCAGGCGGAGT
GTGAAGTAAAAGAAGAAAAGTCAGCTTCAGGACCGTGTTT
TCCTCCCACTTTCAGCGTGTCTGAGATCAAAAATAAGCAG
CGCAGACATACGATGTTCCTTAAACTCAAAGAGGAGAAAA
GAAAGAAAAGAATGGAACTGAAGAAAAAAGAAAGAAAAGC
TCTTGGTGATAAGGCTCCACCTAAAGAAGTTCCCAAGACA
ATAGAAAACCAGAGAATATACGATGAAACTACAGTCAATC
CAGAGGATGAGGAGGTGGCTTTTGATGAAGGAACTGATGA
GTTCTCGGCTTACTTCAATCGGCTTACAAATCCTAAAGTT
CTCATCACCACTTCAGACAGGCCCAGAGGAAGGACGGTGA
GATTTTGCGATCAATTGGCAACAGTAATCCCACATGCATA
CGTGTACTACAGAAGAGGTCTGGCTCTGAAAAAAGTCATT
CCACAATGTATATCAAGGGGTTTCACGTATCTTATGGTGA
TTAATGAAGACCGAAAAGTGCCAAGTATCCTTTTCTCAGA
TATCAATGTTACCACTGTTAAGATCTTCTTAAGAAATGTT
TGTATTTTGTACTTGGTGGGGTATTGGGATATATTACC

OTTDART00000028930 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000028930|OTTDARG00000022466|ZDB-GENE-040625-177 rpf1|no_translation DKEY-228N9.1-002 LG_none CR848761.19,CR854846.8 Danio rerio protein_coding KNOWN, 758 bp
GATTCTGTCACATGTGTGTGAAGACAGTGGCAGCTGAAAA
TGGATTGTACAGATTCAACATCTTCGGGACATGTTTCTAA
AAAAAAGAGCAAAACAAAGAAACTAAAGCGAACGATGAAA
GCCGTTAAAGCGCCAGTGGAAGAGATGGACCAGGCGGAGT
GTGAAGTAAAAGAAGAAAAGTCAGCTTCAGGACCGTGTTT
TCCTCCCACTTTCAGCGTGTCTGAGATCAAAAATAAGCAG
CGCAGACATACGATGTTCCTTAAACTCAAAGAGGAGAAAA
GAAAGAAAAGAATGGAACTGAAGAAAAAAGAAAGAAAAGC
TCTTGGTGATAAGGCTCCACCTAAAGAAGTTCCCAAGACA
ATAGAAAACCAGAGAATATACGATGAAACTACAGTCAATC
CAGAGGATGAGGAGGTGGCTTTTGATGAAGGAACTGATGA
GTTCTCGGCTTACTTCAATCGGCTTACAAATCCTAAAGTT
CTCATCACCACTTCAGACAGGCCCAGAGGAAGGACGGTGA
GATTTTGCGATCAATTGGCAACAGTAATCCCACATGCATA
CGTGTACTACAGAAGAGGTCTGGCTCTGAAAAAAGTCATT
CCACAATGTATATCAAGGGGTTTCACGTATCTTATGGTGA
TTAATGAAGACCGAAAAGTGCCAAGTATCCTTTTCTCAGA
TATCAATGTTACCACTGTTAAGATCTTCTTAAGAAATGTT
TGTATTTTGTACTTGGTGGGGTATTGGGATATATTACC

Related Transcripts

Transcripts related to rpf1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rpf1-201 (1) Ensembl	Ensembl	1,523 nt	Select Tool
mRNA	rpf1-203 (1) Ensembl	Ensembl	1,213 nt	Select Tool ZFIN BLAST
ncRNA	rpf1-002	Ensembl	758 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations