Gene

tbx3b

ID
ZDB-GENE-060531-144
Name
T-box transcription factor 3b
Symbol
tbx3b Nomenclature History
Previous Names
  • tbx3l
  • si:dkey-49o11.4 (1)
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in atrium and cardiac ventricle. Human ortholog(s) of this gene implicated in ulnar-mammary syndrome. Orthologous to human TBX3 (T-box transcription factor 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Choudhry et al., 2013
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tbx3b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
ulnar-mammary syndrome Alliance Ulnar-mammary syndrome 181450
1 - 1 of 1
Associated With tbx3b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018186 Transcription factor, T-box, conserved site
Domain IPR046360 T-box transcription factor, DNA-binding domain
Domain IPR048387 T-box transcription factor 2/3, repressor domain
Family IPR001699 T-box transcription factor
Homologous_superfamily IPR008967 p53-like transcription factor, DNA-binding domain superfamily
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Length p53-like transcription factor, DNA-binding domain superfamily T-box superfamily T-box transcription factor T-box transcription factor 2/3, repressor domain T-box transcription factor, DNA-binding domain Transcription factor, T-box, conserved site
UniProtKB:F1QV06
1 - 1 of 1
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tbx3b-201 (1) Ensembl 2,242 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations