Gene

upk3b

ID

ZDB-GENE-060526-348

Name

uroplakin 3b

Symbol

upk3b Nomenclature History

Previous Names

upk3a
upk3l
si:dkey-93f15.2

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Involved in establishment of planar polarity involved in nephron morphogenesis. Predicted to localize to integral component of membrane. Orthologous to several human genes including UPK3A (uroplakin 3A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Mitra et al., 2012
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With upk3b Human Ortholog

No data available

Associated With upk3b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR024831	Uroplakin-3

Domain Details Per Protein

Protein	Length	Uroplakin-3
UniProtKB:A2CE76 InterPro	276

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	upk3b-201 (1) Ensembl	Ensembl		1,582 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-upk3l	polyclonal	upk3b		Rabbit	IHC		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations