Gene

col8a1b

ID
ZDB-GENE-060503-140
Name
collagen, type VIII, alpha 1b
Symbol
col8a1b Nomenclature History
Previous Names
  • col8a2 (1)
  • si:ch73-162i18.4 (1)
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to extracellular matrix and extracellular space. Orthologous to human COL8A1 (collagen type VIII alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col8a1b Human Ortholog
No data available
Associated With col8a1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001073 C1q domain
Family IPR050392 Collagen/C1q domain-containing
Homologous_superfamily IPR008983 Tumour necrosis factor-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length C1q domain Collagen/C1q domain-containing Collagen triple helix repeat Tumour necrosis factor-like domain superfamily
UniProtKB:X1WGI4 733
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA col8a1b-201 (1) Ensembl 2,945 nt
mRNA col8a1b-202 (1) Ensembl 3,140 nt
mRNA col8a1b-203 (1) Ensembl 2,314 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations