Gene

pitx3

ID
ZDB-GENE-041229-4
Name
paired-like homeodomain 3
Symbol
pitx3 Nomenclature History
Previous Names
  • zgc:109716
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and RNA polymerase II transcription factor binding activity. Involved in adenohypophysis development; lens fiber cell differentiation; and positive regulation of transcription, DNA-templated. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in anterior segment dysgenesis; anterior segment dysgenesis 1; cataract; cataract 11 multiple types; and cataract 9 multiple types. Is expressed in several structures, including ectoderm; head; immature eye; nervous system; and neurogenic field. Orthologous to human PITX3 (paired like homeodomain 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
63 figures from 37 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pitx3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
anterior segment dysgenesis 1 Alliance Anterior segment dysgenesis 1, multiple subtypes 107250
cataract 11 multiple types Alliance Cataract 11, multiple types 610623
cataract 11 multiple types Alliance Cataract 11, syndromic, autosomal recessive 610623
Associated With pitx3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR003654 OAR domain
Family IPR016233 Homeobox protein Pitx/unc30
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeobox protein Pitx/unc30 Homeodomain OAR domain
UniProtKB:Q6QU75 293
UniProtKB:A0A8M9QJL4 207
UniProtKB:B2GRZ8 293
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pitx3-201 (1) Ensembl 1,865 nt
mRNA pitx3-202 (1) Ensembl 884 nt
mRNA pitx3-203 (1) Ensembl 2,269 nt
mRNA pitx3-204 (1) Ensembl 921 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-pitx3 polyclonal IgG Rabbit
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations