Gene
rbfox1l
- ID
- ZDB-GENE-040923-2
- Name
- RNA binding fox-1 homolog 1, like
- Symbol
- rbfox1l Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Exhibits RNA binding activity. Involved in several processes, including RNA splicing; muscle fiber development; and regulation of RNA splicing. Localizes to nucleus. Is expressed in several structures, including cardiovascular system; fin bud; musculature system; paraxial mesoderm; and skeletal muscle satellite cell.
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 14 figures from 9 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR025670 | Fox-1 C-terminal domain |
Domain | IPR034237 | FOX1, RNA recognition motif |
Family | IPR017325 | RNA binding protein fox-1 homolog 1-3 |
Family | IPR047131 | RNA binding protein fox-1 homolog 1-like |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | Fox-1 C-terminal domain | FOX1, RNA recognition motif | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA binding protein fox-1 homolog 1-3 | RNA binding protein fox-1 homolog 1-like | RNA recognition motif domain |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9P7V7
|
217 | |||||||
UniProtKB:A0A8M2B4J5
|
370 | |||||||
UniProtKB:Q7ZT82
|
382 | |||||||
UniProtKB:B3DK66
|
382 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
rbfox1l-201
(1)
|
Ensembl | 2,205 nt | ||
ncRNA |
rbfox1l-002
(1)
|
Ensembl | 624 nt |
Interactions and Pathways
No data available
Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
---|---|---|---|---|---|---|---|
Ab1-rbfox1l | polyclonal | Rabbit |
|
4 |
Plasmids