Gene

stm

ID

ZDB-GENE-031112-4

Name

starmaker

Symbol

stm Nomenclature History

Previous Names

cb885 (1)
id:ibd5112
sb:cb148
sb:cb568
sb:cb584

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Involved in detection of gravity and inner ear development. Predicted to localize to extracellular region. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; central nervous system; immature eye; and sensory system.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

62 figures from 24 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb148 (11 images)
cb568 (10 images)
cb584 (24 images)
cb885 (14 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With stm Human Ortholog

No data available

Associated With stm Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

Protein	Length
UniProtKB:A0A8M2B5U7 InterPro	600
UniProtKB:A2VD23 InterPro	613
UniProtKB:A0A8M2B5U9 InterPro	612

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	stm-201 (1) Ensembl	Ensembl	691 nt	Select Tool ZFIN BLAST
mRNA	stm-202 (1) Ensembl	Ensembl	3,332 nt	Select Tool ZFIN BLAST
mRNA	stm-203 (1) Ensembl	Ensembl	746 nt	Select Tool ZFIN BLAST
mRNA	stm-204 (1) Ensembl	Ensembl	706 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-stm		stm		Rabbit	IHC		2

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations