Gene

pcbp2

ID

ZDB-GENE-030131-563

Name

poly(rC) binding protein 2

Symbol

pcbp2 Nomenclature History

Previous Names

fb36h02
wu:fb36h02
zgc:55964 (1)

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Orthologous to several human genes including PCBP2 (poly(rC) binding protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from 4 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:55964 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pcbp2 Human Ortholog

No data available

Associated With pcbp2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR004087	K Homology domain
Domain	IPR004088	K Homology domain, type 1
Homologous_superfamily	IPR036612	K Homology domain, type 1 superfamily

Domain Details Per Protein

Protein	Length	K Homology domain	K Homology domain, type 1	K Homology domain, type 1 superfamily
UniProtKB:Q7ZVK5 InterPro	318

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	pcbp2-201 (1) Ensembl	Ensembl		4,435 nt	Select Tool ZFIN BLAST
mRNA	pcbp2-202 (1) Ensembl	Ensembl		5,193 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-pcbp2	polyclonal	pcbp2	IgG	Rabbit	WB	ABclonal	1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations