Gene

cnbpa

ID
ZDB-GENE-030131-5045
Name
CCHC-type zinc finger, nucleic acid binding protein a
Symbol
cnbpa Nomenclature History
Previous Names
  • CNBP (1)
  • zCNBP (1)
  • cellular nucleic acid binding protein (1)
  • fe36b09
  • wu:fe36b09
  • zff9 (1)
  • zgc:63625 (1)
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Exhibits chromatin binding activity and nucleic acid binding activity. Involved in several processes, including neural crest cell fate specification; regulation of transcription, DNA-templated; and skeletal system development. Predicted to localize to cytoplasm. Human ortholog(s) of this gene implicated in myotonic dystrophy type 2. Is expressed in several structures, including alar plate midbrain region; digestive system; immature eye; nervous system; and pectoral fin. Orthologous to several human genes including CNBP (CCHC-type zinc finger nucleic acid binding protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cnbpa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
myotonic dystrophy type 2 Alliance Myotonic dystrophy 2 602668
Associated With cnbpa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001878 Zinc finger, CCHC-type
Family IPR051714 CCHC-type Zinc Finger Nucleic Acid Binding
Homologous_superfamily IPR036875 Zinc finger, CCHC-type superfamily
Domain Details Per Protein
Protein Length CCHC-type Zinc Finger Nucleic Acid Binding Zinc finger, CCHC-type Zinc finger, CCHC-type superfamily
UniProtKB:F1Q6Z5 163
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cnbpa-201 (1) Ensembl 1,573 nt
mRNA cnbpa-202 (1) Ensembl 1,060 nt
mRNA cnbpa-203 (1) Ensembl 928 nt
mRNA cnbpa-204 (1) Ensembl 765 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-cnbpa Rabbit
  • WB
2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations