FIGURE

Fig. 1

ID
ZDB-FIG-180925-1
Publication
Jarque et al., 2018 - An automated screening method for detecting compounds with goitrogenic activity using transgenic zebrafish embryos
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Fig. 1

Overview of the KNIME workflow that was applied to quantify tg:mcherry fluorescence in transgenic embryos.

The region of the thyroid gland (tg) was selected by manually drawing a rectangle on the appropriate autofocus or Z-stack images after background removal (A, corresponding bright field image shown in B). The thyroid gland was automatically detected and converted to a label, (C) The label was overlaid onto the original image (D) and used to calculate the sum of pixels. tg–area with thyroid follicles, ba–branchial arches, m–mouth.

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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