FIGURE

Fig. 8

ID

ZDB-FIG-130109-35

Publication

Mosaliganti et al., 2012 - ACME: Automated Cell Morphology Extractor for Comprehensive Reconstruction of Cell Membranes

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Fig. 8

Robust correspondence between membrane and nuclear segmentations.

Algorithm performance was assessed by matching automated segmentations obtained from the nuclear and membrane channels. In the ideal case, each individual nucleus would match with a unique membrane and vice-versa. (A) A single 2D image plane is shown with contours of membrane and nuclear segmentations overlaid on raw data. Some cells have their corresponding nuclei located out-of-plane. The lack of a one-to-one correspondence indicates an error. For example, an over-segmentation of the membrane channel (white arrow) causes one of the membrane components to not contain a nucleus. (B) 3D renderings of cells from membrane and nuclear segmentations.

Expression Data

Genes:	Citrine Tomato
Fish:	hm25Tg hm26Tg
Anatomical Terms:	somite nucleus somite plasma membrane
Stage:	1-4 somites

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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