Genomic Feature
hg65
- ID
- ZDB-ALT-170809-31
- Name
- hg65
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sood Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 10: 32663953 (GRCz11) (1) Details
- Nucleotide change
- G/AGTGGATCAATATA
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp inserted / 1 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TGTCTGTCATCAGTACTAACCGACAGTCTGGGGTCTTAATCTGCATTTGAGGCTGTTTTTTTGTCTTTGTGGACACTAGTTTTGGAAATGCACAGGACTGTACCGAGTCTCCCTCTGGCGCCGTCGGTGAAGGTGAAGCTCATCAATGCGGGTTTCCAAGCGGCTTCAGACCTGACAGACATGAGGCCTCTTCAGCTCTGCAAAGGCAACTTATTTATATTTACAGCAGTAAAACATTGAGGAAAACTTTGAATATTTGCTCTGAAATCGCATGTATGACTTCAAAACAACATTTGCACTAATTGACTTATAACACGTTGTACTTTGACTGTTACTTTGATTGGCTAGTAATATGATTTCTCCATTTAGAATTTGCAAATAATACTCTTCTAAAACTTTGTTTTGCAGAGGCAGGTATTTCTCAAGAGGAGGCAGTGGAGCTGCTGCAGATGTTGAGAGATGATGCTCAGCCTCAACAGCAGAGGGCAGCAGCAGACGGC
G/AGTGGATCAATATA TAACGGCACTGGATCTCCTGCACCAGGAGCAAACTCTGGGCAGCATAGTGACCTTCTGCTCTGGTCTAGATGATGCTATTGGCGGAGGCGTGCCTGTGGGAAAGACCACCGAGATCTGTGGGGCCCCTGGGGTCGGAAAGACTCAGCTTTGGTATGAAAAGAAATGGATTATGAGTTGTGTTGGTGCATTTTATAGGGATAGTTCACTCAAAACTGAAAATTTAGTCATCCTTTACTTGTTTCAAAGTGAATCTCACTCTAAAGTGCTTTCAAACCTGTGATTTATTTTATTTGATTTTGTTGACCAAAAATATATATTTTGAAGAAAGCTAAAAACCTGTAGCCACAGCCTGACTTTCATGGAAGAAAAAAAAAACTAAAACTATGAATTGTCTACAGGTTTTTAGCTTTCTTCAAAATATATATTTATTGGTCAACAGAATAAAGAAACTCTAAGAAACTTTAGGTTAAGTAAACTGAGTAAATTGTCCTTGAAACTC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| rad51chg65/hg65 | Homozygous | ♀+/- ♂+/- | Fig. 5 from Ramanagoudr-Bhojappa et al., 2018 | ||
| rad51chg65/hg65 (NHGRI-1) | Homozygous | Unknown | 3 figures from Raman et al., 2021 | ||
| rad51chg65/+ (AB) | Heterozygous | Unknown |
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Supplemental Information
- Genotyping protocol
- None
- Raman, R., Ramanagoudr-Bhojappa, R., Dhinoja, S., Ramaswami, M., Carrington, B., Jagadeeswaran, P., Chandrasekharappa, S.C. (2021) Pancytopenia and thrombosis defects in zebrafish mutants of Fanconi anemia genes. Blood cells, molecules & diseases. 93:102640
- Ramanagoudr-Bhojappa, R., Carrington, B., Ramaswami, M., Bishop, K., Robbins, G.M., Jones, M., Harper, U., Frederickson, S.C., Kimble, D.C., Sood, R., Chandrasekharappa, S.C. (2018) Multiplexed CRISPR/Cas9-mediated knockout of 19 Fanconi anemia pathway genes in zebrafish revealed their roles in growth, sexual development and fertility. PLoS Genetics. 14:e1007821
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