Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
17	64.5 cM	z9692	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
17	408.25 cR	Z9692	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
17	4919.0 cR	z9692	Goodfellow T51 (T51)	Geisler, Robert	Data
17	108.6 cM	z9692	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z4053	SSLP	17		Schonthaler et al., 2008	Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39  ... Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39 to LG17 between z4053 and z9692 on the T51 RH mapping panel. The closest linkage established was between vsp39 and the EST fc27c07.
vps39	GENE	17	1.4 cM	Schonthaler et al., 2008	Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39  ... Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39 to LG17 between z4053 and z9692 on the T51 RH mapping panel. The closest linkage established was between vsp39 and the EST fc27c07.
fc27c07	EST	17		Schonthaler et al., 2008	Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39  ... Schonthaler, et al. (2008. Development 135(2):387-399.) reports mapping vps39 to LG17 between z4053 and z9692 on the T51 RH mapping panel. The closest linkage established was between vsp39 and the EST fc27c07.
z11340	SSLP	17		Stickney et al., 2007	mutation mapped by Stickney et al. (2007) mutation mapped by Stickney et al. (2007)
bmp4	GENE	17		Stickney et al., 2007	mutation mapped by Stickney et al. (2007) mutation mapped by Stickney et al. (2007)
st37	Feature	17		Stickney et al., 2007	mutation mapped by Stickney et al. (2007) mutation mapped by Stickney et al. (2007)

OTHER MAPPING INFORMATION

Chr 17 Stickney et al., 2007 mutation mapped by Stickney et al. (2007) mutation mapped by Stickney et al. (2007)

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,236		60.0
Forward Primer	CCAGGCGAGTTCTCTCTTTG
Reverse Primer	AGAGCAGACGAGCTTTCCAG
IND	0,246		60.0
Forward Primer	CCAGGCGAGTTCTCTCTTTG
Reverse Primer	AGAGCAGACGAGCTTTCCAG
EKW	0,238,234		60.0
Forward Primer	CCAGGCGAGTTCTCTCTTTG
Reverse Primer	AGAGCAGACGAGCTTTCCAG
TU	0,238		60.0
Forward Primer	CCAGGCGAGTTCTCTCTTTG
Reverse Primer	AGAGCAGACGAGCTTTCCAG