Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	7.4 cM	z9382	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
1	590.0 cR	z9382	Goodfellow T51 (T51)	Geisler, Robert	Data
1	0.0 cM	z9382	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
runx1	GENE	1	3.0 cR	Burns et al., 2002	Burns et al. (2002) report mapping runxa on the T51 RH panel between z11913 and z9382 on linkage group 1.
z11913	SSLP	1		Burns et al., 2002	Burns et al. (2002) report mapping runxa on the T51 RH panel between z11913 and z9382 on linkage group 1.
z9394	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
z9394	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
atp1a1a.2	GENE	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
atp1a1a.1	GENE	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
atp1a1a.4	GENE	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
z9394	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
atp1a1a.3	GENE	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
z9394	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.

OTHER MAPPING INFORMATION

Chr 1 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.   Chr 1 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to LG01 between z9382 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.2 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.   Chr 1 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to LG01 between z9382 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.3 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.   Chr 1 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,142		60.0
Forward Primer	TGTGCGCACCTGTTCTTGT
Reverse Primer	CACACTGGAGGACACACACC
IND	150		60.0
Forward Primer	TGTGCGCACCTGTTCTTGT
Reverse Primer	CACACTGGAGGACACACACC
TU	150,142		60.0
Forward Primer	TGTGCGCACCTGTTCTTGT
Reverse Primer	CACACTGGAGGACACACACC
EKW	150,0,142		60.0
Forward Primer	TGTGCGCACCTGTTCTTGT
Reverse Primer	CACACTGGAGGACACACACC