ZFIN ID: ZDB-GENE-000926-1

Mapping Details

Gene Name: atonal bHLH transcription factor 7
Symbol: atoh7
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 13 25,449,681 - 25,450,725 GRCz11
Ensembl 13 25,449,681 - 25,450,725 GRCz11
Vega 13 25,319,231 - 25,320,275 GRCv10
NCBI Map Viewer 13 25,449,699 - 25,450,724 GRCz11
UCSC 13 - GRCz11
Mapped Clones containing atoh7
RP71-PACKTRZ Chr: 13 Details
DKEY-51A16 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa16352 13 25,449,912 GRCz11 Busch-Nentwich et al., 2013
13 25,319,462 GRCz10 Busch-Nentwich et al., 2013
13 25,673,802 Zv9 Busch-Nentwich et al., 2013
sa35489 13 25,450,046 GRCz11 Busch-Nentwich et al., 2013
13 25,319,596 GRCz10 Busch-Nentwich et al., 2013
13 25,673,936 Zv9 Busch-Nentwich et al., 2013
th241 13 25,449,886 GRCz11 Kay et al., 2001

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
13 2143.0 cR ath5 Goodfellow T51 (T51) Finger-Baier, Karin Data
13 2143.0 cR atoh7 Goodfellow T51 (T51) Masai, Ichiro Data
13 52.9 cM atoh7 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z15777 SSLP 13 3.85 cM Kay et al., 2001 Kay et al. (2001. Neuron 30:725-736) report mapping lak th241 to a 0.7 cM region on LG 13 between z15777 and z10582. They also mapped atoh7 to the same region using the T51 radiation hybrid panel. They cloned atoh7 from lak th241 and showed that there was a point mutation, which was confirmed by RFLP analysis.
z10582 SSLP 13 0.71 cM Kay et al., 2001 Kay et al. (2001. Neuron 30:725-736) report mapping lak th241 to a 0.7 cM region on LG 13 between z15777 and z10582. They also mapped atoh7 to the same region using the T51 radiation hybrid panel. They cloned atoh7 from lak th241 and showed that there was a point mutation, which was confirmed by RFLP analysis.

OTHER MAPPING INFORMATION: No data available