ZFIN ID: ZDB-GENE-021226-3

Mapping Details

Gene Name:	laminin, gamma 1
Symbol:	lamc1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	2	35,880,600 - 35,979,178	GRCz11
Ensembl	2	35,880,600 - 35,979,178	GRCz11
Vega	2	35,898,143 - 35,996,721	GRCv10
NCBI Map Viewer	2	35,880,600 - 35,979,095	GRCz11
UCSC	2	-	GRCz11

Mapped Clones containing lamc1
CH211-194I4	Chr: 2 Details
DKEY-161L11	Chr: 2 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
hi1193Tg	2	35,924,004 - 35,924,005	GRCz11	ZFIN Curated Data
hi2557Tg	2	35,880,992 - 35,880,993	GRCz11	ZFIN Curated Data
hi3890Tg	2	35,900,512 - 35,900,513	GRCz11	ZFIN Curated Data
hi4131Tg	2	35,933,682 - 35,933,683	GRCz11	ZFIN Curated Data
m86	2	35,939,841	GRCz11	Parsons et al., 2002
m466	2	35,881,007	GRCz11	Parsons et al., 2002
sa379	2	35,954,454	GRCz11	Busch-Nentwich et al., 2013
	2	35,971,997	GRCz10	Busch-Nentwich et al., 2013
	2	35,675,287	Zv9	Busch-Nentwich et al., 2013
sa9866	2	35,971,297	GRCz11	Busch-Nentwich et al., 2013
	2	35,988,840	GRCz10	Busch-Nentwich et al., 2013
	2	35,692,130	Zv9	Busch-Nentwich et al., 2013
sa19814	2	35,955,923	GRCz11	Busch-Nentwich et al., 2013
	2	35,973,466	GRCz10	Busch-Nentwich et al., 2013
	2	35,676,756	Zv9	Busch-Nentwich et al., 2013
sa30600	2	35,967,988	GRCz11	Busch-Nentwich et al., 2013
	2	35,985,531	GRCz10	Busch-Nentwich et al., 2013
	2	35,688,821	Zv9	Busch-Nentwich et al., 2013
sa39876	2	35,965,952	GRCz11	Busch-Nentwich et al., 2013
	2	35,983,495	GRCz10	Busch-Nentwich et al., 2013
	2	35,686,785	Zv9	Busch-Nentwich et al., 2013
la023638Tg	2	35,602,191 - 35,602,201	Zv9
la023639Tg	2	35,648,924 - 35,648,934	Zv9
la028800Tg	2	35,646,031 - 35,646,041	Zv9
la028801Tg	2	35,648,212 - 35,648,222	Zv9

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z11023	SSLP	2	1.6 cM	Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
z7632	SSLP	2	1.8 cM	Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
elavl1a	GENE	2		Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.

Genomic Feature ti263a is an allele of lamc1