ZFIN ID: ZDB-GENE-020905-1

Mapping Details

Gene Name: ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
Symbol: atp2a1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 3 26,081,343 - 26,157,066 GRCz11
Ensembl 3 26,081,343 - 26,157,066 GRCz11
Vega 3 25,950,472 - 26,026,195 GRCv10
NCBI Map Viewer 3 26,145,034 - 26,154,478 GRCz11
UCSC 3 - GRCz11
Mapped Clones containing atp2a1
CH211-11K18 Chr: 3 Details
CH73-46H18 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
dta5 3 26,152,109 GRCz11 Olson et al., 2010
mi25i 3 26,147,472 GRCz11 Hirata et al., 2004
mi289a 3 26,153,429 GRCz11 Hirata et al., 2004
sa10632 3 26,153,283 GRCz11 Busch-Nentwich et al., 2013
3 26,022,412 GRCz10 Busch-Nentwich et al., 2013
3 26,881,824 Zv9 Busch-Nentwich et al., 2013
sa16659 3 26,151,664 GRCz11 Busch-Nentwich et al., 2013
3 26,020,793 GRCz10 Busch-Nentwich et al., 2013
3 26,883,443 Zv9 Busch-Nentwich et al., 2013
sa17743 3 26,152,194 GRCz11 Busch-Nentwich et al., 2013
3 26,021,323 GRCz10 Busch-Nentwich et al., 2013
3 26,882,913 Zv9 Busch-Nentwich et al., 2013
tq206 3 26,152,955 GRCz11 Hirata et al., 2004

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 46.5 cM atp2a1 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
ntn1b GENE 3 4.3 cR Hirata et al., 2004
z4161 SSLP 3 Hirata et al., 2004
tq206 Feature 3 Hirata et al., 2004

OTHER MAPPING INFORMATION
Genomic Feature tq206 is an allele of atp2a1