Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 16 813,780 - 817,937 GRCz11 Ensembl 16 813,780 - 817,937 GRCz11 Vega 16 737,423 - 741,827 GRCv10 NCBI Map Viewer 16 813,574 - 817,781 GRCz11 UCSC 16 - GRCz11 UCSC 16 - GRCz11

Mapped Clones containing irx1a
CH73-211K12	Chr: 16 Details

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
nrsn1	GENE	16		Dildrop et al., 2004	Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ... Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a, irx4a, zgc:73062 and aytl2 genes to contigs on LG 16. Using contig data and STS/EST mapping data, these genes were colocalized the same chromosomal position on LG 16.
z9535	SSLP	16	3.0 cR	Dildrop et al., 2004	Dildrop and Ruther (2004, Dev. Genes Evol. 214(6):267-276) report mapping irx1a to LG16 on T51 panel, 5' of gene.
lpcat1	GENE	16		Dildrop et al., 2004	Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ... Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a, irx4a, zgc:73062 and aytl2 genes to contigs on LG 16. Using contig data and STS/EST mapping data, these genes were colocalized the same chromosomal position on LG 16.
irx2a	GENE	16		Dildrop et al., 2004	Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ... Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a, irx4a, zgc:73062 and aytl2 genes to contigs on LG 16. Using contig data and STS/EST mapping data, these genes were colocalized the same chromosomal position on LG 16.
irx4a	GENE	16		Dildrop et al., 2004	Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ... Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a, irx4a, zgc:73062 and aytl2 genes to contigs on LG 16. Using contig data and STS/EST mapping data, these genes were colocalized the same chromosomal position on LG 16.
z1837	SSLP	16		Feijoo et al., 2004	Feijoo et al. (2004 Dev. Genes Evol. 214(6):277-284) report mapping irx1a to LG16 using the T51 radiation hybrid panel.
z1837	SSLP	16		Joseph, 2004	Zebrafish-hampster somatic cell radiation hybrid analysis was used to map  ... Zebrafish-hampster somatic cell radiation hybrid analysis was used to map irx1a to LG16 betweeen SSLPs Z1837 and Z7231.
z7231	SSLP	16		Joseph, 2004	Zebrafish-hampster somatic cell radiation hybrid analysis was used to map  ... Zebrafish-hampster somatic cell radiation hybrid analysis was used to map irx1a to LG16 betweeen SSLPs Z1837 and Z7231.

OTHER MAPPING INFORMATION

Chr 16 Joseph, 2004 Zebrafish-hampster somatic cell radiation hybrid analysis was used to map irx1a to LG16 betweeen  ... Zebrafish-hampster somatic cell radiation hybrid analysis was used to map irx1a to LG16 betweeen SSLPs Z1837 and Z7231.   Chr 16 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a,  ... Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx1a, irx2a, irx4a, zgc:73062 and aytl2 genes to contigs on LG 16. Using contig data and STS/EST mapping data, these genes were colocalized the same chromosomal position on LG 16.