ZFIN ID: ZDB-GENE-980526-531

Mapping Details

Gene Name:	retinoic acid receptor gamma a
Symbol:	rarga

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	23	35,847,200 - 35,963,735	GRCz11
Ensembl	23	35,847,200 - 35,963,735	GRCz11
Vega	23	35,748,397 - 35,864,932	GRCv10
NCBI Map Viewer	23	35,847,200 - 35,965,288	GRCz11
UCSC	23	-	GRCz11

Mapped Clones containing rarga
DKEY-148F24	Chr: 23 Details
DKEY-43N10	Chr: 23 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa32460	23	35,959,209	GRCz11	Busch-Nentwich et al., 2013
	23	35,860,406	GRCz10	Busch-Nentwich et al., 2013
	23	36,010,753	Zv9	Busch-Nentwich et al., 2013
la010912Tg	23	35,992,769 - 35,992,779	Zv9
la014420Tg	23	35,950,008 - 35,950,018	Zv9
la014421Tg	23	35,993,591 - 35,993,601	Zv9
la022698Tg	23	35,977,271 - 35,977,281	Zv9
la022699Tg	23	35,993,556 - 35,993,566	Zv9
la022701Tg	23	35,997,974 - 35,997,984	Zv9
la028558Tg	23	35,982,564 - 35,982,574	Zv9
la028559Tg	23	36,002,569 - 36,002,579	Zv9

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	125.1 cM	rarg	Mother of Pearl (MOP)	Postlethwait, John H.	Data
23	434.81 cR	rarg	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
23	5391.0 cR	rarg	Goodfellow T51 (T51)	Geisler, Robert	Data
23	108.7 cM	rarg	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by rarga
fb01e02 Chr: 23 Details

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	624		36.0
Forward Primer	GGGCCATAACTCTGAAGATG
Reverse Primer	GAACCCGTTGAAAGTACACTG

Genomic Feature sa32460 is an allele of rarga