ZFIN ID: ZDB-GENE-980526-144

Mapping Details

Gene Name:	hairy-related 6
Symbol:	her6

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	6	36,551,083 - 36,552,844	GRCz11
Ensembl	6	36,551,083 - 36,552,844	GRCz11
Vega	6	36,573,189 - 36,574,950	GRCv10
NCBI Map Viewer	6	36,551,083 - 36,552,768	GRCz11
UCSC	6	-	GRCz11

Mapped Clones containing her6
DKEY-111K7	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
co3005	6	36,552,295 - 36,552,298	GRCz11	Stenzel et al., 2022
sa20748	6	36,552,252	GRCz11	Busch-Nentwich et al., 2013
	6	36,574,358	GRCz10	Busch-Nentwich et al., 2013
	6	36,330,824	Zv9	Busch-Nentwich et al., 2013
sa38559	6	36,552,435	GRCz11	Busch-Nentwich et al., 2013
	6	36,574,541	GRCz10	Busch-Nentwich et al., 2013
	6	36,331,007	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
6	134.1 cM	her6	Mother of Pearl (MOP)	Postlethwait, John H.	Data
6	352.38 cR	HER-6	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
6	74.43 cM	her6	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	419		36.0
Forward Primer	GCAACCGACGGACAGTTCGC
Reverse Primer	AACGTGGAAAGATACCGCAAATA

Genomic Feature sa20748 is an allele of her6