ZFIN ID: ZDB-GENE-020104-1

Mapping Details

Gene Name: HNF1 homeobox Ba
Symbol: hnf1ba
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 15 15,997,149 - 16,012,963 GRCz11
Ensembl 15 15,997,149 - 16,012,963 GRCz11
Vega 15 16,061,127 - 16,076,941 GRCv10
NCBI Map Viewer 15 15,997,149 - 16,012,963 GRCz11
UCSC 15 - GRCz11
Mapped Clones containing hnf1ba
DKEYP-118E10 Chr: 15 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
hi548Tg 15 16,002,516 - 16,002,517 GRCz11 ZFIN Curated Data
hi1843Tg 15 16,007,795 - 16,007,796 GRCz11 ZFIN Curated Data
hi2169Tg 15 16,012,609 - 16,012,610 GRCz11 ZFIN Curated Data
s430 15 16,010,150 GRCz11 Lancman et al., 2013
s917 15 16,010,056 GRCz11 Chi et al., 2008
sa10100 15 16,007,240 GRCz11 Busch-Nentwich et al., 2013
15 16,071,218 GRCz10 Busch-Nentwich et al., 2013
15 15,026,255 Zv9 Busch-Nentwich et al., 2013
la019161Tg 15 15,026,126 - 15,026,136 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
15 667.0 cR tcf2 Goodfellow T51 (T51) Zhou, Yi Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
chunp30164 STS 15 4.0 cR Gong et al., 2004 Gong, et al. (2004. Gene 338:35-46.) reports mapping tcf2 to LG15 between fj56h04 and chunp30164 on the T51 mapping panel.
fj56h04 EST 15 4.0 cR Gong et al., 2004 Gong, et al. (2004. Gene 338:35-46.) reports mapping tcf2 to LG15 between fj56h04 and chunp30164 on the T51 mapping panel.
z4396 SSLP 15 Song et al., 2007 Song et al. (2007) established an mst map cross by mating a male mst  ...

OTHER MAPPING INFORMATION
Chr 15 Golling et al., 2002 Adam Amsterdam (pers. comm.) reports that tcf2 is mapped to LG15 on the T51 mapping panel.
Chr 15 Song et al., 2007 Song et al. (2007) established an mst map cross by mating a male mst heterozygote to a female from  ...
Markers Encoded by hnf1ba
af244140 Chr: 15 Details
Genomic Feature s430 is an allele of hnf1ba
Marker Type Chr Distance Publication / Person Comments
z4396 SSLP 15 Lancman et al., 2013 Lancman et al. (2013, Development 140(13):2669-2679) report that the s430  ...
Genomic Feature s430 is an allele of hnf1ba
Chr 15 Lancman et al., 2013 Lancman et al. (2013, Development 140(13):2669-2679) report that the s430 mutation is linked to the  ...
Genomic Feature sa10100 is an allele of hnf1ba