ZFIN ID: ZDB-GENE-000502-1

Mapping Details

Gene Name:	bone morphogenetic protein receptor, type IAa
Symbol:	bmpr1aa

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	13	22,555,791 - 22,619,790	GRCz11
Ensembl	13	22,555,791 - 22,619,790	GRCz11
Vega	13	22,425,341 - 22,489,340	GRCv10
NCBI Map Viewer	13	22,555,791 - 22,619,802	GRCz11
UCSC	13	-	GRCz11

Mapped Clones containing bmpr1aa
DKEY-230G10	Chr: 13 Details
CH211-134M17	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
hu4087	13	22,615,424	GRCz11	Smith et al., 2011
p3	13	22,614,468 - 22,614,520	GRCz11	Zebrafish Nomenclature Committee
sa8457	13	22,613,313	GRCz11	Busch-Nentwich et al., 2013
	13	22,482,863	GRCz10	Busch-Nentwich et al., 2013
	13	22,753,525	Zv9	Busch-Nentwich et al., 2013
sa44785	13	22,614,549	GRCz11	Busch-Nentwich et al., 2013
	13	22,484,099	GRCz10	Busch-Nentwich et al., 2013
	13	22,754,761	Zv9	Busch-Nentwich et al., 2013
la010910Tg	13	22,696,258 - 22,696,268	Zv9
la011473Tg	13	22,699,661 - 22,699,671	Zv9
la018458Tg	13	22,742,091 - 22,742,101	Zv9
la027404Tg	13	22,699,190 - 22,699,200	Zv9

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	316.4 cR	BMPR-IA	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
13	50.2 cM	bmpr1a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fgf8a	GENE	13	1.3 cM	Correa et al., 2005
neurog3	GENE	13	1.3 cM	Correa et al., 2005
wnt8b	GENE	13	2.5 cM	Correa et al., 2005
pax2a	GENE	13	2.6 cM	Correa et al., 2005
chuk	GENE	13	1.3 cM	Correa et al., 2005
z17223	SSLP	13		Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...
z6259	SSLP	13		Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...
hu4087	Feature	13	0.0 KB	Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...

Genomic Feature hu4087 is an allele of bmpr1aa

Marker	Type	Chr	Distance	Publication / Person	Comments
bmpr1aa	GENE	13	0.0 KB	Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...
z6259	SSLP	13	2.1 cM	Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...
z17223	SSLP	13	26.5 cM	Smith et al., 2011	Smith, K.A. et al.(2011, PLoS Genet. 7(9):e1002289) mapped hu4087 to Chr. 13 ...

Genomic Feature la018458Tg is an allele of bmpr1aa