ZFIN ID: ZDB-GENE-990415-171 |
Gene Name: | cadherin 2, type 1, N-cadherin (neuronal) |
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Symbol: | cdh2 |
PHYSICAL MAP AND BROWSER
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Mapped Clones containing cdh2 | |
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DKEYP-38F5 | Chr: 20 Details |
CH73-317E11 | Chr: 20 Details |
PHYSICAL MAPPING
Feature | Chr | Position | Assembly | Citations |
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fr7 | 20 | 17,802,963 | GRCz11 | Lele et al., 2002 |
hi1389Tg | 20 | 17,745,615 - 17,745,616 | GRCz11 | ZFIN Curated Data |
hi3096Tg | 20 | 17,746,175 - 17,746,176 | GRCz11 | ZFIN Curated Data |
hi3644Tg | 20 | 17,746,387 - 17,746,388 | GRCz11 | ZFIN Curated Data |
m117 | 20 | 17,791,592 | GRCz11 | ZFIN Curated Data |
rw95 | 20 | 17,803,604 | GRCz11 | Masai et al., 2003 |
sa206 | 20 | 17,743,502 | GRCz11 | Busch-Nentwich et al., 2013 |
20 | 17,843,919 | GRCz10 | Busch-Nentwich et al., 2013 | |
20 | 17,789,419 | Zv9 | Busch-Nentwich et al., 2013 | |
sa11989 | 20 | 17,803,635 | GRCz11 | Busch-Nentwich et al., 2013 |
20 | 17,904,052 | GRCz10 | Busch-Nentwich et al., 2013 | |
20 | 17,849,552 | Zv9 | Busch-Nentwich et al., 2013 | |
sa15918 | 20 | 17,803,010 | GRCz11 | Busch-Nentwich et al., 2013 |
20 | 17,903,427 | GRCz10 | Busch-Nentwich et al., 2013 | |
20 | 17,848,927 | Zv9 | Busch-Nentwich et al., 2013 | |
sa16882 | 20 | 17,743,578 | GRCz11 | Busch-Nentwich et al., 2013 |
20 | 17,843,995 | GRCz10 | Busch-Nentwich et al., 2013 | |
20 | 17,789,495 | Zv9 | Busch-Nentwich et al., 2013 | |
sa32283 | 20 | 17,803,605 | GRCz11 | Busch-Nentwich et al., 2013 |
20 | 17,904,022 | GRCz10 | Busch-Nentwich et al., 2013 | |
20 | 17,849,522 | Zv9 | Busch-Nentwich et al., 2013 | |
tb8 | 20 | 17,798,887 | GRCz11 | Warga et al., 2007 |
tm101 | 20 | 17,803,003 | GRCz11 | Lele et al., 2002 |
la013796Tg | 20 | 17,791,696 - 17,791,706 | Zv9 | |
la021425Tg | 20 | 17,793,303 - 17,793,313 | Zv9 | |
la021426Tg | 20 | 17,793,465 - 17,793,475 | Zv9 | |
la021427Tg | 20 | 17,809,294 - 17,809,304 | Zv9 |
Chr | Location | Mapped As | Panel | Mapped By | Scoring |
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20 | 487.37 cR | ncad | Loeb/NIH/5000/4000 (LN54) | Dawid, Igor B. | Data |
20 | 1948.0 cR | cdh2 | Goodfellow T51 (T51) | Palardy, Greg | Data |
Note: Physical map location as
displayed in the genome browsers is more precise than linkage map location. Physical map location should be used whenever possible. |
Marker | Type | Chr | Distance | Publication / Person | Comments |
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z3964 | SSLP | 20 | Lele et al., 2002 | Lele et al. 2002 (Development 129:3281-3294) report mapping cdh2 to Linkage Group 20, indistinguishably close to SSLP marker z3964. | |
z9343 | SSLP | 20 | 0.35 cM | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). |
z7171 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z21170 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z3954 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z23564 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z9794 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z10056 | SSLP | 20 | Masai et al., 2003 | Masai et al. (2003 Dev. 130:2479-2494) reported no recombination between the rw95 allele of pac and the SSLP z9343 in 290 meioses (<0.35 cM). | |
z3964 | SSLP | 20 | 0.23 cM | Warga et al., 2007 | |
z6425 | SSLP | 20 | 0.69 cM | Warga et al., 2007 |
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Markers Encoded by cdh2 | ||
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ft03g07 Chr: 20 Details |
Genomic Feature vu125 is an allele of cdh2 |