Genomic Feature
tc321
- ID
- ZDB-ALT-980203-1457
- Name
- tc321
- Synonyms
-
- AC121A (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Nüsslein-Volhard Lab
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 1: 50541183 (GRCz11) (1) Details
- Nucleotide change
- T/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- T>A (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
GCCTGTTATTAAACTATTTATTAACTGTAATAAGAGGCAATTTAATCATAACTTATTATTAAAACAGCTATCATAGCATAACTATCATAACAGCTCTTTTTGGATTCTCGGAAGCTATAGAAATTAAAAATGTATAACAGCAAATACGTTGGGACTATTGTTTTTGTTCACATCCCTCAAAATGGTCTAAGCATATTTCATATTTTAAATATTGATTATTCATTGCATGCATCTGAACTAAATATTTTTAAAATAAATTTGTTTAAATGTACCCATGTCTAACTTGTATTGTAGATTGTATCCTACAGATGTCAGAAACTAAATTTATTTTTGTTAATTTACCATTAGCCTGCACATTCAATCTGTAAAAGATATATTTTAAAGGCATTAGAAAATCTGATAAACCATAAACATTTAAAGTTAGAGTGTGATTTTTTTTATATAGTCACTGATAAAAAATTGACAATTTTAACTGACATCTAATTTCTCTATTTCAGTGT
T/A GTGGGATACTCGTCTTTTGGGTGAGAGCAACAGTAACAGAGAGATGTACTTGAAAACCGTCCTGCGAGAAATGATCACCTACATCCTCTTCCTGCTCACCCTCTGCATAAGTAGGTTGAAAACTACATGATAGAGTGATACCAGGCTCAAATTACACAACAACAGCTTCACGATTTCTTTATGATAGTGTCATTAAAGTGTCATTTTTCTCATTAAAGGTTCTGTGAAATTAAAATAATATATTTTTTTTTTAGATGTTTGAATCAGTATGTTAGTTTTAGGATATCTTTAAGCTAGTTGTGGATTTCTTCAGATGAGCAGTGCGATCTGATGAAGCAATATTTAGAGGTGAACTCGTTCCTTTCGAGTGCGCATGCGCATTAGATGCCAATTTTGCTTGATTAGAACGTTTAGAAAGGAAACTTATGAGACAGTTGTTGTTTAATTTTATTATTGTAATGTAATTGGCAAACAGTTTTAGAGAATTTGATGTTTTCTTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None
- Juan, T., Ribeiro da Silva, A., Cardoso, B., Lim, S., Charteau, V., Stainier, D.Y.R. (2023) Multiple pkd and piezo gene family members are required for atrioventricular valve formation. Nature communications. 14:214214
- Vignes, H., Vagena-Pantoula, C., Prakash, M., Fukui, H., Norden, C., Mochizuki, N., Jug, F., Vermot, J. (2022) Extracellular mechanical forces drive endocardial cell volume decrease during zebrafish cardiac valve morphogenesis. Developmental Cell. 57(5):598-609.e5
- Fukui, H., Chow, R.W., Xie, J., Foo, Y.Y., Yap, C.H., Minc, N., Mochizuki, N., Vermot, J. (2021) Bioelectric signaling and the control of cardiac cell identity in response to mechanical forces. Science (New York, N.Y.). 374:351-354
- Jacinto, R., Sampaio, P., Roxo-Rosa, M., Pestana, S., Lopes, S.S. (2021) Pkd2 Affects Cilia Length and Impacts LR Flow Dynamics and Dand5. Frontiers in cell and developmental biology. 9:624531
- Maerker, M., Getwan, M., Dowdle, M.E., McSheene, J.C., Gonzalez, V., Pelliccia, J.L., Hamilton, D.S., Yartseva, V., Vejnar, C., Tingler, M., Minegishi, K., Vick, P., Giraldez, A.J., Hamada, H., Burdine, R.D., Sheets, M.D., Blum, M., Schweickert, A. (2021) Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5. Nature communications. 12:5482
- Campinho, P., Lamperti, P., Boselli, F., Vilfan, A., Vermot, J. (2020) Blood Flow Limits Endothelial Cell Extrusion in the Zebrafish Dorsal Aorta. Cell Reports. 31:107505
- Duchemin, A.L., Vignes, H., Vermot, J. (2019) Mechanically activated Piezo channels modulate outflow tract valve development through the Yap1 and Klf2-Notch signaling axis. eLIFE. 8:
- Ferreira, R.R., Pakula, G., Klaeyle, L., Fukui, H., Vilfan, A., Supatto, W., Vermot, J. (2018) Chiral Cilia Orientation in the Left-Right Organizer. Cell Reports. 25:2008-2016.e4
- Hofherr, A., Seger, C., Fitzpatrick, F., Busch, T., Michel, E., Luan, J., Osterried, L., Linden, F., Kramer-Zucker, A., Wakimoto, B., Schütze, C., Wiedemann, N., Artati, A., Adamski, J., Walz, G., Kunji, E.R.S., Montell, C., Watnick, T., Köttgen, M. (2018) The mitochondrial transporter SLC25A25 links ciliary TRPP2 signaling and cellular metabolism. PLoS Biology. 16:e2005651
- Steed, E., Faggianelli, N., Roth, S., Ramspacher, C., Concordet, J.P., Vermot, J. (2016) klf2a couples mechanotransduction and zebrafish valve morphogenesis through fibronectin synthesis. Nature communications. 7:11646
1 - 10 of 19
Show