Genomic Feature

sd43

ID
ZDB-ALT-241007-1
Name
sd43
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Traver Lab
Current Source
Other Pages
Notes
Comment Citation
sd43 homozygotes are partially viable into adulthood and fertile, with no  ... Kondo et al., 2023
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 29835577 - 29835586 (GRCz11) (1) Details
Nucleotide change
AAGGCTCTCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TATTTTATATCAGCCCAGCTCTAGATAAACCTAGATTTAGTATTACATTTTATAGAAATATTAATTATTAGTATTTTATTAGTTATTAATATTTACCCTTTTATTCTCATTATAATTTTACACTTTTTAATGTTCCGTGGTTGAGTGAATGATGTTTTTGCAAATGATTATAATTACATTCTTACTCCAATACTGTAACGAAGTTAATAACTGACTGTTTACAGTTTAATTTAAGTTGCTCCCATAATTTGTCCAAGGCGTCATGAGGTAAAGCATAAACTTAAATGTTTTGCACTATTGTGTAGCATTACAAATGTAACCGTCGTCTGGCCCAAAATCGTATCTGCCTGTTTTGGATGATCTTCATTTTGGACGCATCCTTATTTGCACAGGAAGATAAACAAAGCATTGCTGTTTTCTTTCAGGAGTTGACTTGCAATGTTCCTACACTTCTGACTTTGGAGCAACACCCAGAGTAGAATGGAAGTTCAAGGATCTCA
AAGGCTCTCA/- GACATTAGTCTACTTTGATGGCAAGCCAACTGGTATGAACGCAACTTTAAAACCTTCTCTTATTGTCTGTTAATGTGTCAAATGAGAATAGATCAATGAGATGTTGCATTTGTGTTTTGTTTTTTCATCAGGTCAATATACAGGCCGTGTCACCATGTACGATAAAGGACTCCGATTTAACAAAGTGACACGAGCAGACACTGGAGACTATGACTGTGAGGTGTCTGGAAGTGGTGGATATGGAGAGAATACCATTAAACTCACAGTACTTGGTAAATCAGTTTGAGTTATGCATAGTCTTACTACCGAATAGTAAGTATTAAGTATATGTTAAGATACACTTAATACCATCTAAGTGTACTCAACTGTGCTATTGAGACACTCTGAAATTGAACTAAAATGTGCTTTTAACATACTATATCTGTATTTTAAAAAATATATTTAGTTACAACTAGAAATACACTTGAACCCTAATTTTAAACATATTTATAAATATATTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations