Genomic Feature

fr56

ID
ZDB-ALT-240813-11
Name
fr56
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hammerschmidt Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 44539787 - 44539791 (GRCz11) (1) Details
Nucleotide change
TTTTG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTTTATCTGAATCATTGAATGAAGACTCAAGAAATGAGGTGATGTGAAATGTATATTATGAGAAAGCGAAAGTGTTTTTAATACTTCGATCAATGTAAACCTTTTGTTATAGACCTCAAAACCAGAACCTTTTAAATTACATAACAAACCCTTTATAGGGAAGTATTTAGAGGCTTCTCTCTAATATAATCTGTGCTTATTCTGTTAAAAATGTACTTTGCGTTTTCCTTTTCTTTTGTTTTTCCAGTCAGAATCAGTTTTCCATTGAGAATGTGCTGCAGTCATTTTTATTTCTTTCTTCATACTGACTTTTATCTGGTTGATTTCAGAGAGACCGGAATTTATAGAGATGAGTAAAAAGTCTTTTTTTTTTCCTCTGTAGGACAAGGACTGGGACCAAGCTGTCACATTTTTGCCTGCATCAGATCATAAAAAGATGGAGAAGAAAAAGGGCCCTGGGAAAATTGGGATCATTGTTGGTCTGGTGATCCTGGCAGCTG
TTTTG/- GCTTTGATCATAGGGCTTGTGGTCTGGCATTTCCATTGTAAGTCAGAATGGCAAACATGTACAGCAAAACCTCAGTGACAACGTTTACATGCACATCAGTTATAAAATGTTTTGCCTTAATCTAAATAAGGAGATTATAATATGTCAAAACAAACTGAATTTAAATTGTGTTCATTTGAATTATCGACAATTGTAAATTAATAAATTAGAGTTTTTATATGCTGTTAAATTTTAGTATTTTAACAAACAAAATATCTACATTCTAGGAATTAAGAACACAAAAAAAGTTTGAAAATACATCTATAAAAAAACCTGCCTTGAAAGATTCTGTTGTCTTAAATTTCAAGTGTTCAATGTTCAAATTATAAAATTAAGAAATTTAAATGAAGAAATTCAAAACAATTTTTAACGGCATATAAAAATTCTGATTTATTAAATTACTATTGTCAACTATTAAAATAAACAATTGAAATTCAGATTATTTTGGCAGATTATTAGCT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
st14afr56/fr56Homozygous♀+/- ♂+/-Fig 1 with image from Hatzold et al., 2023
atp1b1am14/m14; st14afr56/fr56ComplexFig 1 with image from Hatzold et al., 2023
st14afr56/fr56 + MO1-llgl2 + MO6-pax2aComplexFig 7 with image from Hatzold et al., 2023
1 - 3 of 3
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.