Genomic Feature

cbm22

ID
ZDB-ALT-240429-1
Name
cbm22
Synonyms
  • cbm16 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Cavodeassi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 34998174 - 34998183 (GRCz11) (1) Details
Nucleotide change
TCCCCCGCAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGACGATTTGTTGTCATGTGATCAGCGAGCTGGTATAAAGCGCAAGGAAAGGTCCGCCCTCTTTGGAATCCTGGTCTGGCCTTTAGGAGGGTCTCCCCAGATAGAATAAGCGTGTGGATGTGGGGATCTGGGCAACCTTTTGATTCCGTGCCGACAGTAATCCATTAAAAGCCTATGGCACTGGTGACACACTGGCACGTCCTCTCCGCCTCTCCCGCATCTGTTCGGCGCGTCCTATGAGTTCTCCCGAACCGAGAGCGCAGGTAACACGCAGGCTCAGCAAACCCGGCGCTTTTCCACCGTAGCCCATCGGGAAACCCGAGAGAGCCATGACTCTGAGCTCCGAGATGTCGGATGCGTCTGTGCTCTCGGAGGAGACCGACATTGACGTGGTTGGGGAGGGAGATGATGGTGACGGCCACACGCGCTCCTACGTGGACGAGGTGGCTCAGATGCACGACGAGATCCTGCTCAACGGTTCGCCGCCTGGTGTGGATGCC
TCCCCCGCAC/- GGGACCCCTACAAGCCAGCAAGTAAAAACACCCTGGTGAAGCCCCCATACTCCTACATCGCACTCATCACCATGGCAATCCTCCAGAGTCCCAAGAAGCGCCTGACGCTGAGCGAGATTTGTGACTTCATCAGTAACAGATTTCCGTACTATCGGGAAAAGTTCCCAGCTTGGCAGAACTCTATCCGGCACAACCTGTCCTTAAATGACTGTTTTGTCAAGATACCACGAGAGCCCGGGAATCCCGGCAAAGGCAACTACTGGACGCTAGACCCTGAGTCCGCCGACATGTTTGATAACGGGAGCTTTCTACGCCGCCGGAAACGCTTTAAGCGCCAGCAGGCGCCTGAACTTCTCCGCGAGCACGGAGGTTTTCTTCCCTCTGCTGCTGCGTATGGCTATGGACCCTACGGTTGTGGATACGGTCTGCAGCTTCAGTCTTATCACGCACATTCCGCGCTCCTCGCCTTTCAGCAGCAACAGCAGCAGCAGCCGCCCCCG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
foxd1cbm22/cbm22Homozygous♀+/- ♂+/-2 figures with image from Hernández-Bejarano et al., 2022Fig. 2. with image from Hernández-Bejarano et al., 2022
foxd1cbm22/+Heterozygous♀+/- ♂+/-Fig. 2. with image from Hernández-Bejarano et al., 2022
foxd1cbm22/cbm22; kj9TgComplexFig. 2. with image from Hernández-Bejarano et al., 2022Fig. 2. with image from Hernández-Bejarano et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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