Genomic Feature

hsi16

ID
ZDB-ALT-240419-3
Name
hsi16
Synonyms
  • mut1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Berman Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 20: 25993848 - 25994314 (GRCz11) (1) Details
Nucleotide change
CTGGGAACCGGAAGTCAAACCGACACATCAACACCTTGGATTAATTGTGATATATTTAATTCAGAGCATGAATGAACATAAGTTGACAGTGACACAGTATAGCGTTATTGATGCCAAATATTGTAATAAATGAACTTACTTTGCATATGCCTTTTCCATGAGAGCACTCCAAAATTCATTATTCTGTCCAGACCTGGTAAAGACCAGCTTGTTTTTGTATGTGGGAAGTCGATCGTCAATAACCACATCCACCCACTCACCATAGCGCCAAAACTAGAAACATTCAAAATTGTGCTTGTGCTTGTGCTTCATTCATCCAAGTGTAGGGTTCATGTGTCAAATATGAAATGCATGACAGTTTTGATGCCCATATACCTGGAAATGGAAAATGCCAGCATAGTTTTCAGTGAAGCTTTGGTCATGAGGAACAACCCTCTTCAGGATGACATCATTCAGGGTCAGGCAAG/CTGGGAACCGGAAGTCAAACCGACACATCAACA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
33 bp inserted / 467 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACATTGGACGCTTGTACCAGTACCTCAATTGACTTGTATTTGTGTTTAGTCCTCCGTCCCACACTGAGAACACCATGAATAGTATAATTTGAGTTAGGGATTCAATGACTCTCACTTGATGCCATCTACTGACATACCAGTGGATCAAAGAGGAAGGCTGACTGAAAAATGTCCATTGGTAATGCACAGACAGAGAGTCTGTCTAAAAGCACGAAAGCATCAAAGACAAAGTGTGGAATAATAATAATTTTAAAACATTGCACTTTTTTGACAGAGAAGCAACATATCTTTTTTATTCCTATTATATTTTAATAAAGGAAGCGAAACGTACGTCTATGGCACAGCCCATGAGGGATCCTCTCTTCAGAGCCTTCCTCATGATGTTGTACAACTCTTTCGGGGCTTCTGTAATCTCATAGAACTCAGTTACACCTCCAGTGAAGTCCTCCATAGCCTCCAATGAGTTCCCTCCCTTTAAGGCTTCATAAGAGCCATGTAAC
CTGGGAACCGGAAGTCAAACCGACACATCAACACCTTGGATTAATTGTGATATATTTAATTCAGAGCATGAATGAACATAAGTTGACAGTGACACAGTATAGCGTTATTGATGCCAAATATTGTAATAAATGAACTTACTTTGCATATGCCTTTTCCATGAGAGCACTCCAAAATTCATTATTCTGTCCAGACCTGGTAAAGACCAGCTTGTTTTTGTATGTGGGAAGTCGATCGTCAATAACCACATCCACCCACTCACCATAGCGCCAAAACTAGAAACATTCAAAATTGTGCTTGTGCTTGTGCTTCATTCATCCAAGTGTAGGGTTCATGTGTCAAATATGAAATGCATGACAGTTTTGATGCCCATATACCTGGAAATGGAAAATGCCAGCATAGTTTTCAGTGAAGCTTTGGTCATGAGGAACAACCCTCTTCAGGATGACATCATTCAGGGTCAGGCAAG/CTGGGAACCGGAAGTCAAACCGACACATCAACA CTATGGCAGCCAACAGCCAACAGTCTCCTGCAGATGTTAATGGGCCATTAAAGGTTTTTCCACATGCTTTATGACAACAC  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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