Genomic Feature
hu12408
- ID
- ZDB-ALT-240320-1
- Name
- hu12408
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- den Hertog Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 31751428 - 31751434 (GRCz11) (1) Details
- Nucleotide change
- CTTTATC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CCAAGATACAATATTTAAGACTATCGTTATATCTCTACTAGATATTCACTGACAGCTCAAATTTAACCTTGTTTTAGTCAAGATGTCTATTAGACATTTATTAAACGCACAAAAAAATGCTTGCTCGGTTGTATTGTAAATGTGAAAATTTAAATGGAATGATTCCATGATTAACCTATGTAAACATCATAACCATAATATTTTAAATGGTATGATGGGAGTCTGGACTTTGCATAGACAAGGTTAGCAAATGTCACATTTCATAAAACACTAAGTACATTGGTAAAATGCAGATAAAACTCATCCTGAAGGTCAGTATGCGGAATATCAGAATCTCCCAAAGCCAAAGGTCAAATAAAATGGCTAATTTGAGCTATTTCTTGTTTAACTTGGCAAACACACCTGGAAATGTCCTGAATGAGGGTCAGATATGATTGCTTACCTCTCTGTGGTGGGATCGGAACAGTTTAAAGGGTATTTGAGCTCAATAACAGTCCCAT
CTTTATC/- CTGTAGGGTTCCATGATCTCCAGTGTAGTACTCCACTAACTCTGCCAATGTGGCAAACTTCTCCCCACCATACAGGTCATAATAATCCCCTGTGTTTTGAATCCTAATGTGGGTGATGATCTCCCCAACTCTGGAGAAAAAAAAAGAGAAGACAGTTGATGATGTAAAATAAGTATTTCTACTTTATCATCGGAAAAATCGCTAAACATAGACTAATCAGAACAAAATCTATCAGCATCAGAATGCAATGTCAAAGGAAATTGAGAAACAGAAAGTTAGTGTGTAGAAATGTTATGTGAGTATGTAGTAATTACCTGAGAAGAAGACTTTTTTGCAAAGCATTGCAGCTATTTTTTTTGCTGTCATAGATATTGATTACCCATATCAATCATGCTTTTCACCAAAGTGTTTTCAAAAAGAAATTCAGGATAAAACTTGACCTTATTTCAACTCCCTTATTCCCTCATGAAACATTAGTGTCAGATTTAGAATAATATATA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ptpn6hu12408/hu12408 (TL) | Homozygous | ♀+/- ♂+/- | 4 figures  from Allers et al., 2023 | 4 figures from Allers et al., 2023 | |
| ptpn6hu12408/+ (TL) | Heterozygous | ♀+/- ♂+/- | 2 figures from Allers et al., 2023 | Fig. 1. from Allers et al., 2023 | |
| ptpn6hu12408/hu12408; gl23Tg; i114Tg (TL) | Complex | 2 figures from Allers et al., 2023 | Fig. 4. from Allers et al., 2023 | ||
| ptpn6hu12408/hu12408; i114Tg (TL) | Complex | Fig. 4. from Allers et al., 2023 | 2 figures from Allers et al., 2023 | ||
| ptpn6hu12408/hu12408; la2Tg; s916Tg (TL) | Complex | Fig. 5. from Allers et al., 2023 | Fig. 5. from Allers et al., 2023 | ||
| ptpn6hu12408/+; i114Tg (TL) | Complex | Fig. 2. from Allers et al., 2023 | |||
| ptpn6hu12408/+; la2Tg; s916Tg (TL) | Complex | Fig. 5. from Allers et al., 2023 |
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Supplemental Information
- Genotyping protocol
- None