Genomic Feature

xt69

ID
ZDB-ALT-240213-4
Name
xt69
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Tobin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Delins
Variant Location
Chr 23: 39093922 - 39093952 (GRCz11) (1) Details
Nucleotide change
TGTGGCCCGTTCTCGCAGCCCGTCGCCCCAC/CGTTGTGCCCGTTCTCGCAGCCCGTCGCCCCACAA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
35 bp inserted / 31 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GGCTTTTCTGCGTACGAGCAACTGGAGGCCAAGGGCTACCTGGAGCACGCCCGACCCAACAACCAGGCCTTGAGCCCCAGAATCGAAATCACACCTTCACGTGAGCTCTACAATCATGGTCAAAACCAGCTCATAAACACCAGCCCCAGTCCTGGACTCACCGTGCCAGGTCAAGATCCGTTAGCCTATCGGGAGCCACAATGCTTGAGTCCCGCCAGTAGCAATTCATCCACTTCCTGGCATTCAGAAAACCTCTCACCCTGGGCATCGCCCTGCGTTTCGCCCAGTAACAGCCAGCTTTCTGGAGACCTCTGTCCACGACTGCAGGGCGTCCATACGGGGTCTCCAAGAACCAGTCCGGGCACTTCTCCACAGACCACCAGTCTGTCTGAGGACGCTTGCATTGGCCCGCGCTCTCCCTCCCCCCGACCTGGATCGCGTTCAACCTCCCCTCTATGCAAACGCACCTACGAGATGTACACAAACCCAAACCTTGTGCC
TGTGGCCCGTTCTCGCAGCCCGTCGCCCCAC/CGTTGTGCCCGTTCTCGCAGCCCGTCGCCCCACAA GGTGGCCACAAGGAGCATCACGTCAATCATTACATCTCAAATAATGGCGTAAATGGCTTTAGTGTTGGCCAGGCGGCTTCTGTTCCTACTAAAATCGTAAAGACCAACCAGCAGGGCTACCCCCTTTATTCAGACAACCACACTGAGGGTTACCTGCTGTCCTGTGAGCAGGATATGAAGGGCAAACCTGGCCCCGAGCCTTTCTTCGTCATCCCTCAAATCTGGCCCAAACAGCTGGTACCTGGCATGTGCAGGTAAATATTTGCTTTTTTTTTCTTGTGTCTTTACCCATAAAAGTATAGTTCACCCCAAGTTATAATTACCAGGGATGTCCTGATCAGGTTTTTTTGCCCTCCTTTGACTTTGAATATCTGACAAAACCGAAAGCTGATCCGATACTTCTAAAAATACATGAAAAAAGAATAAAGAAGAGCGAAGAAACCGATTCAGGATGTTAATTTTGTTATTTAATTCACCCTATTTTAACATTCAACAACTCT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nfatc2axt69/+; s843Tg/s843TgComplexFigure 3. with image from Brewer et al., 2022
nfatc2axt69/xt69; s843Tg/s843TgComplex2 figures with image from Brewer et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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