Genomic Feature
pc44
- ID
- ZDB-ALT-230404-2
- Name
- pc44
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Peter Currie Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| homozygotes did not survive past 6 dpf | Berger et al., 2022 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 32306904 - 32306916 (GRCz11) (1) Details
- Nucleotide change
- TCATGGCGGAGGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp deleted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AACAATGGTTTGTAATCCCAGCAGAACTCCATTAGCCATGATGGCTTAAAATTGGCAACATGGAATAAGTGAAGGCTGAATGAGATGCCAACTGGGGTTTCCCCATAGGGGCCAGTTTCATAAGTCCATATGGGCTTATGTTAAGTTAGTCACCTATTTTTATATATTTTTCTATTATGTCAGACATAAAATGTTATTAAATTAGCTGCATAAAAAAAGAATGAAAACACGGATTATCTCATGCAAACTAGCTAGGCAAACTGCTCTGTCAGATGCTTATATTTATGCATCTGACTGCATAATGGACTTCTTATTAACTAGAATCTAGAGGAAAAAGGATCTGGAAAATAGATAACACTCGATGTAAGATGGAATAAAATCATAAATGCATCTTCACCGTTTAATATTTTGAGTTTCACTGTATCCGAGCTGCTCCTGTAGTAGCCGGGCTCGTCCATTGGGGGCGCGCTGTCAATCAAACTCTAAATCTGTCGAGATGG
TCATGGCGGAGGG/- CACAGCTGTTCTGAGGAGGAATAGACCAGGCACCAAGGCGAAGGTAAAATGAACAGCTTATAACAAGTTGACGCTCTCTTTCAAACTCAGACCTGTTCGTGGAGCACATCCTAATGTACTATTAGCGTAAAAAACAATTTGTTCTTCTGCCAGCGGAAGCCGCAGATATGCTAAAGAGCTAAGCTAACAGTTAGCCTAGAAAACTAATGATCCTTAAAGAAGGGGTTTTAACTGTGTATTTTGTTAAATATTTGTCCGTAATATGATTTGCTTGCTTTTCCAAAAGTACTTGTATATAGAGTGAAATAAGAGACAAGAGGGGCCTGATATTAGAGGTTTTATGATCTAGTTATTTGGCGAACAGCAGTCAGCTAGCAGCCGTCTACAAATACCCGGATGAACATTGCTGAATATGTATTTACATTAAATTATTATGTTTAAAACACAACAAAGTTCATTGACAGTGTCCTGCAGCATTAAGTAGGTACTCCTAGGTAACC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None